RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 XBP1P17861 261 aa21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 EVX2Q03828 476 aa21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 SBK1Q52WX2 424 aa21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 NT5DC1Q5TFE4 455 aa21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 OLFM4Q6UX06 510 aa21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 ATP8A2Q9NTI2 1148 aa21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 AATFQ9NY61 560 aaKnown RBP eCLIP21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 V9GY48 417 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 MAST2Q6P0Q8 1798 aa21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 PRDX5P30044 214 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 UTP14CQ5TAP6 766 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 ARMCX5Q6P1M9 558 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 NYAP1Q6ZVC0 841 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 TMTC3Q6ZXV5 915 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 CCDC24Q8N4L8 307 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 CCDC150Q8NCX0 1101 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 SERTAD1Q9UHV2 236 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 HOOK1Q9UJC3 728 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 LAMB1P07942 1786 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 FAM205CA6NFA0 338 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 MYO1BO43795 1136 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 TRIM37O94972 964 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 KRT2P35908 639 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 SARSP49591 514 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 DHX8Q14562 1220 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 TXNRD3Q86VQ6 643 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 AMIGO3Q86WK7 504 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 ANKRD7Q92527 254 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 NOL10Q9BSC4 688 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 PAXBP1Q9Y5B6 917 aa21.06■□□□□ 0.96
SEMA3B-209ENST00000456560 POLR2DO15514 142 aaKnown RBP21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 PDE4BQ07343 736 aa21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 POSTNQ15063 836 aa21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 EARS2Q5JPH6 523 aaKnown RBP21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 CCAR2Q8N163 923 aaKnown RBP21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 ARHGEF1Q92888 912 aaKnown RBP21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 MAN1B1Q9UKM7 699 aa21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 TRIM75PA6NK02 468 aa21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 TNFRSF25Q93038 417 aa21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 CSRNP2Q9H175 543 aa21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 CCNL1Q9UK58 526 aaPredicted RBP21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 RTCBQ9Y3I0 505 aaKnown RBP21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 KIAA1551Q9HCM1 1747 aa21.05■□□□□ 0.96
SEMA3B-209ENST00000456560 hCG_1642624A0A1W2PR95 340 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 ACTN4O43707 911 aaKnown RBP21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 CYP2D6P10635 497 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 ATP2B1P20020 1258 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 NPY5RQ15761 445 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 SBF2Q86WG5 1849 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 ARPP21Q9UBL0 812 aaPredicted RBP21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 CNTNAP5Q8WYK1 1306 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 PRR29P0C7W0 189 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 FAM196AQ6ZSG2 479 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 USP49Q70CQ1 688 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 DPF2Q92785 391 aa21.04■□□□□ 0.96
SEMA3B-209ENST00000456560 CCDC88AQ3V6T2 1871 aa21.03■□□□□ 0.96
SEMA3B-209ENST00000456560 CEP135Q66GS9 1140 aa21.03■□□□□ 0.96
SEMA3B-209ENST00000456560 KANK3Q6NY19 840 aa21.03■□□□□ 0.96
SEMA3B-209ENST00000456560 SRBD1Q8N5C6 995 aaKnown RBP21.03■□□□□ 0.96
SEMA3B-209ENST00000456560 SPDYE4A6NLX3 237 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 CBFA2T2O43439 604 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 NMT2O60551 498 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 MORC3Q14149 939 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 FANCLQ9NW38 375 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 ZHX1Q9UKY1 873 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 TNRC6CQ9HCJ0 1690 aaKnown RBP21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 KCNJ6P48051 423 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 UBASH3AP57075 661 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 PTPN14Q15678 1187 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 FAM47AQ5JRC9 791 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 SPTY2D1Q68D10 685 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 SPATA20Q8TB22 786 aa21.02■□□□□ 0.96
SEMA3B-209ENST00000456560 IGSF3O75054 1194 aa21.01■□□□□ 0.95
SEMA3B-209ENST00000456560 SFPQP23246 707 aaKnown RBP eCLIP21.01■□□□□ 0.95
SEMA3B-209ENST00000456560 TRIML1Q8N9V2 468 aa21.01■□□□□ 0.95
SEMA3B-209ENST00000456560 MLKLQ8NB16 471 aa21.01■□□□□ 0.95
SEMA3B-209ENST00000456560 BCL11BQ9C0K0 894 aaPredicted RBP21.01■□□□□ 0.95
SEMA3B-209ENST00000456560 TAF1LQ8IZX4 1826 aa21.01■□□□□ 0.95
SEMA3B-209ENST00000456560 CTCFLQ8NI51 663 aaPredicted RBP21.01■□□□□ 0.95
SEMA3B-209ENST00000456560 SMARCE1Q969G3 411 aa21.01■□□□□ 0.95
SEMA3B-209ENST00000456560 MKRN1Q9UHC7 482 aaKnown RBP21.01■□□□□ 0.95
SEMA3B-209ENST00000456560 WNT7AO00755 349 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 BMP15O95972 392 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 E4F1Q66K89 784 aaPredicted RBP21■□□□□ 0.95
SEMA3B-209ENST00000456560 RCSD1Q6JBY9 416 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 TRMT1Q9NXH9 659 aaKnown RBP21■□□□□ 0.95
SEMA3B-209ENST00000456560 SERPINC1P01008 464 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 VSTM4Q8IW00 320 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 GRAMD1CQ8IYS0 662 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 PDILTQ8N807 584 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 GTPBP4Q9BZE4 634 aaKnown RBP21■□□□□ 0.95
SEMA3B-209ENST00000456560 BRMS1Q9HCU9 246 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 JAG2Q9Y219 1238 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 LY75O60449 1722 aa21■□□□□ 0.95
SEMA3B-209ENST00000456560 SYCP1Q15431 976 aa20.99■□□□□ 0.95
SEMA3B-209ENST00000456560 NOM1Q5C9Z4 860 aaKnown RBP20.99■□□□□ 0.95
SEMA3B-209ENST00000456560 CCDC112Q8NEF3 446 aa20.99■□□□□ 0.95
SEMA3B-209ENST00000456560 FERMT2Q96AC1 680 aa20.99■□□□□ 0.95
SEMA3B-209ENST00000456560 A0A087X0B3 334 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms