RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 PTPREP23469 700 aa16.39■□□□□ 0.21
EPCAM-204ENST00000456133 CCNA1P78396 465 aa16.39■□□□□ 0.21
EPCAM-204ENST00000456133 USP17L24Q0WX57 530 aa16.39■□□□□ 0.21
EPCAM-204ENST00000456133 LPAR1Q92633 364 aa16.39■□□□□ 0.21
EPCAM-204ENST00000456133 PRKAG2Q9UGJ0 569 aa16.39■□□□□ 0.21
EPCAM-204ENST00000456133 VCANP13611 3396 aa16.38■□□□□ 0.21
EPCAM-204ENST00000456133 GH2P01242 217 aa16.38■□□□□ 0.21
EPCAM-204ENST00000456133 HLA-DOAP06340 250 aa16.38■□□□□ 0.21
EPCAM-204ENST00000456133 ATP2B2Q01814 1243 aa16.38■□□□□ 0.21
EPCAM-204ENST00000456133 G3BP1Q13283 466 aaKnown RBP eCLIP16.38■□□□□ 0.21
EPCAM-204ENST00000456133 NPLOC4Q8TAT6 608 aa16.38■□□□□ 0.21
EPCAM-204ENST00000456133 C12orf42Q96LP6 360 aa16.38■□□□□ 0.21
EPCAM-204ENST00000456133 CDX2Q99626 313 aaPredicted RBP16.38■□□□□ 0.21
EPCAM-204ENST00000456133 FEZ1Q99689 392 aa16.38■□□□□ 0.21
EPCAM-204ENST00000456133 ATP11BQ9Y2G3 1177 aa16.38■□□□□ 0.21
EPCAM-204ENST00000456133 SMCHD1A6NHR9 2005 aa16.38■□□□□ 0.21
EPCAM-204ENST00000456133 DNM1LO00429 736 aa16.37■□□□□ 0.21
EPCAM-204ENST00000456133 MSCO60682 206 aa16.37■□□□□ 0.21
EPCAM-204ENST00000456133 CYP2C19P33261 490 aa16.37■□□□□ 0.21
EPCAM-204ENST00000456133 DYNLL1P63167 89 aaKnown RBP16.37■□□□□ 0.21
EPCAM-204ENST00000456133 SHHQ15465 462 aa16.37■□□□□ 0.21
EPCAM-204ENST00000456133 TTC39AQ5SRH9 613 aa16.37■□□□□ 0.21
EPCAM-204ENST00000456133 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
EPCAM-204ENST00000456133 TRPV1Q8NER1 839 aa16.37■□□□□ 0.21
EPCAM-204ENST00000456133 GJC2Q5T442 439 aaPredicted RBP16.36■□□□□ 0.21
EPCAM-204ENST00000456133 ATF7IPQ6VMQ6 1270 aa16.36■□□□□ 0.21
EPCAM-204ENST00000456133 CATSPERGQ6ZRH7 1159 aa16.36■□□□□ 0.21
EPCAM-204ENST00000456133 SEMA6BQ9H3T3 888 aa16.36■□□□□ 0.21
EPCAM-204ENST00000456133 BTBD7Q9P203 1132 aa16.36■□□□□ 0.21
EPCAM-204ENST00000456133 IVNS1ABPQ9Y6Y0 642 aa16.36■□□□□ 0.21
EPCAM-204ENST00000456133 ZNF236Q9UL36 1845 aa16.35■□□□□ 0.21
EPCAM-204ENST00000456133 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
EPCAM-204ENST00000456133 CYP2E1P05181 493 aaPredicted RBP16.35■□□□□ 0.21
EPCAM-204ENST00000456133 HOXC6P09630 235 aa16.35■□□□□ 0.21
EPCAM-204ENST00000456133 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
EPCAM-204ENST00000456133 GRB14Q14449 540 aa16.35■□□□□ 0.21
EPCAM-204ENST00000456133 C9orf50Q5SZB4 431 aa16.35■□□□□ 0.21
EPCAM-204ENST00000456133 MAFAQ8NHW3 353 aaPredicted RBP16.35■□□□□ 0.21
EPCAM-204ENST00000456133 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
EPCAM-204ENST00000456133 MYLIPQ8WY64 445 aa16.35■□□□□ 0.21
EPCAM-204ENST00000456133 DBNDD2Q9BQY9 259 aa16.35■□□□□ 0.21
EPCAM-204ENST00000456133 PRDM5Q9NQX1 630 aaPredicted RBP16.35■□□□□ 0.21
EPCAM-204ENST00000456133 CYBAP13498 195 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 VCAM1P19320 739 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 USP14P54578 494 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 CCDC158Q5M9N0 1113 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 ANO1Q5XXA6 986 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 TATDN1Q6P1N9 297 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 LBX2Q6XYB7 198 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 SLC39A5Q6ZMH5 540 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 ARRDC4Q8NCT1 418 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 BADQ92934 168 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 KIAA1683Q9H0B3 1180 aa16.34■□□□□ 0.21
EPCAM-204ENST00000456133 PIH1D3Q9NQM4 214 aaKnown RBP16.34■□□□□ 0.21
EPCAM-204ENST00000456133 MYH8P13535 1937 aa16.33■□□□□ 0.2
EPCAM-204ENST00000456133 SPDYE16A6NNV3 312 aaPredicted RBP16.33■□□□□ 0.2
EPCAM-204ENST00000456133 IGHA2P01877 340 aa16.33■□□□□ 0.2
EPCAM-204ENST00000456133 GNAI2P04899 355 aa16.33■□□□□ 0.2
EPCAM-204ENST00000456133 CYP7A1P22680 504 aa16.33■□□□□ 0.2
EPCAM-204ENST00000456133 ZAP70P43403 619 aa16.33■□□□□ 0.2
EPCAM-204ENST00000456133 TNNI3KQ59H18 835 aa16.33■□□□□ 0.2
EPCAM-204ENST00000456133 FPGT-TNNI3KV9GXZ4 949 aa16.33■□□□□ 0.2
EPCAM-204ENST00000456133 NAV1Q8NEY1 1877 aa16.32■□□□□ 0.2
EPCAM-204ENST00000456133 SPTBN5Q9NRC6 3674 aaKnown RBP16.32■□□□□ 0.2
EPCAM-204ENST00000456133 KBTBD13C9JR72 458 aa16.32■□□□□ 0.2
EPCAM-204ENST00000456133 USP5P45974 858 aa16.32■□□□□ 0.2
EPCAM-204ENST00000456133 RARSP54136 660 aaKnown RBP16.32■□□□□ 0.2
EPCAM-204ENST00000456133 ABCB5Q2M3G0 1257 aa16.32■□□□□ 0.2
EPCAM-204ENST00000456133 TRIM60Q495X7 471 aa16.32■□□□□ 0.2
EPCAM-204ENST00000456133 CERKLQ49MI3 558 aaPredicted RBP16.32■□□□□ 0.2
EPCAM-204ENST00000456133 DPP9Q86TI2 863 aa16.32■□□□□ 0.2
EPCAM-204ENST00000456133 ARHGAP45Q92619 1136 aa16.32■□□□□ 0.2
EPCAM-204ENST00000456133 TTYH1Q9H313 450 aaPredicted RBP16.32■□□□□ 0.2
EPCAM-204ENST00000456133 RPAP3Q9H6T3 665 aaPredicted RBP16.32■□□□□ 0.2
EPCAM-204ENST00000456133 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
EPCAM-204ENST00000456133 SERPINB13Q9UIV8 391 aa16.32■□□□□ 0.2
EPCAM-204ENST00000456133 A0A0G2JMZ2 1700 aa16.31■□□□□ 0.2
EPCAM-204ENST00000456133 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
EPCAM-204ENST00000456133 MIGA1Q8NAN2 632 aa16.31■□□□□ 0.2
EPCAM-204ENST00000456133 PRDM6Q9NQX0 595 aa16.31■□□□□ 0.2
EPCAM-204ENST00000456133 TNNQ9UQP3 1299 aa16.31■□□□□ 0.2
EPCAM-204ENST00000456133 PLXNA1Q9UIW2 1896 aa16.31■□□□□ 0.2
EPCAM-204ENST00000456133 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
EPCAM-204ENST00000456133 ADORA2AP29274 412 aa16.3■□□□□ 0.2
EPCAM-204ENST00000456133 SMAD3P84022 425 aaKnown RBP16.3■□□□□ 0.2
EPCAM-204ENST00000456133 OLFML2BQ68BL8 750 aa16.3■□□□□ 0.2
EPCAM-204ENST00000456133 SH3RF1Q7Z6J0 888 aa16.3■□□□□ 0.2
EPCAM-204ENST00000456133 MOV10L1Q9BXT6 1211 aaKnown RBP16.3■□□□□ 0.2
EPCAM-204ENST00000456133 EHD4Q9H223 541 aa16.3■□□□□ 0.2
EPCAM-204ENST00000456133 CABP5Q9NP86 173 aa16.3■□□□□ 0.2
EPCAM-204ENST00000456133 PDLIM7Q9NR12 457 aa16.3■□□□□ 0.2
EPCAM-204ENST00000456133 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
EPCAM-204ENST00000456133 PARP14Q460N5 1801 aa16.3■□□□□ 0.2
EPCAM-204ENST00000456133 CDH23Q9H251 3354 aa16.3■□□□□ 0.2
EPCAM-204ENST00000456133 ADCYAP1R1P41586 468 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 OS9Q13438 667 aaPredicted RBP16.29■□□□□ 0.2
EPCAM-204ENST00000456133 SNX17Q15036 470 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 PRAMEF19Q5SWL8 479 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 FERMT2Q96AC1 680 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms