RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 WDR78Q5VTH9 848 aa26.7■■□□□ 1.86
TNFRSF25-208ENST00000453341 USP17L15C9J2P7 530 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 USP17L13C9JLJ4 530 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 USP17L11C9JVI0 530 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 USP17L18D6R9N7 530 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 USP17L22D6RA61 530 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 USP17L17D6RBQ6 530 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 USP17L19D6RCP7 530 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 USP17L20D6RJB6 530 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 IGHA2P01877 340 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 HOXC6P09630 235 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 CNGA1P29973 690 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 CYP2C19P33261 490 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 CCNA1P78396 465 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 USP17L24Q0WX57 530 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 SHHQ15465 462 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 C9orf50Q5SZB4 431 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 BTBD7Q9P203 1132 aa26.69■■□□□ 1.86
TNFRSF25-208ENST00000453341 MSCO60682 206 aa26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 GLRX3O76003 335 aaKnown RBP26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 CYP2E1P05181 493 aaPredicted RBP26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 ATP2B2Q01814 1243 aa26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 GRB14Q14449 540 aa26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 CATSPERGQ6ZRH7 1159 aa26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 MAFAQ8NHW3 353 aaPredicted RBP26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 SEMA6BQ9H3T3 888 aa26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 PRKAG2Q9UGJ0 569 aa26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 ATP11BQ9Y2G3 1177 aa26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 MYH1P12882 1939 aa26.68■■□□□ 1.86
TNFRSF25-208ENST00000453341 PNMA6EA0A0J9YXQ4 647 aa26.67■■□□□ 1.86
TNFRSF25-208ENST00000453341 HLA-DOAP06340 250 aa26.67■■□□□ 1.86
TNFRSF25-208ENST00000453341 DYNLL1P63167 89 aaKnown RBP26.67■■□□□ 1.86
TNFRSF25-208ENST00000453341 GJC2Q5T442 439 aaPredicted RBP26.67■■□□□ 1.86
TNFRSF25-208ENST00000453341 FEZ1Q99689 392 aa26.67■■□□□ 1.86
TNFRSF25-208ENST00000453341 MUC3AQ02505 3323 aa26.67■■□□□ 1.86
TNFRSF25-208ENST00000453341 CYBAP13498 195 aa26.66■■□□□ 1.86
TNFRSF25-208ENST00000453341 VCAM1P19320 739 aa26.66■■□□□ 1.86
TNFRSF25-208ENST00000453341 LBX2Q6XYB7 198 aa26.66■■□□□ 1.86
TNFRSF25-208ENST00000453341 CT47B1P0C2W7 299 aaPredicted RBP26.65■■□□□ 1.86
TNFRSF25-208ENST00000453341 G3BP1Q13283 466 aaKnown RBP eCLIP26.65■■□□□ 1.86
TNFRSF25-208ENST00000453341 TATDN1Q6P1N9 297 aa26.65■■□□□ 1.86
TNFRSF25-208ENST00000453341 ACER1Q8TDN7 264 aa26.65■■□□□ 1.86
TNFRSF25-208ENST00000453341 TTYH1Q9H313 450 aaPredicted RBP26.65■■□□□ 1.86
TNFRSF25-208ENST00000453341 SPDYE16A6NNV3 312 aaPredicted RBP26.64■■□□□ 1.86
TNFRSF25-208ENST00000453341 TTC39AQ5SRH9 613 aa26.64■■□□□ 1.86
TNFRSF25-208ENST00000453341 SLC39A5Q6ZMH5 540 aa26.64■■□□□ 1.86
TNFRSF25-208ENST00000453341 MYLIPQ8WY64 445 aa26.64■■□□□ 1.86
TNFRSF25-208ENST00000453341 DBNDD2Q9BQY9 259 aa26.64■■□□□ 1.86
TNFRSF25-208ENST00000453341 IVNS1ABPQ9Y6Y0 642 aa26.64■■□□□ 1.86
TNFRSF25-208ENST00000453341 ATF7IPQ6VMQ6 1270 aa26.63■■□□□ 1.85
TNFRSF25-208ENST00000453341 BADQ92934 168 aa26.63■■□□□ 1.85
TNFRSF25-208ENST00000453341 KIAA1683Q9H0B3 1180 aa26.63■■□□□ 1.85
TNFRSF25-208ENST00000453341 PIH1D3Q9NQM4 214 aaKnown RBP26.63■■□□□ 1.85
TNFRSF25-208ENST00000453341 ZAP70P43403 619 aa26.62■■□□□ 1.85
TNFRSF25-208ENST00000453341 ANO1Q5XXA6 986 aa26.62■■□□□ 1.85
TNFRSF25-208ENST00000453341 PRDM5Q9NQX1 630 aaPredicted RBP26.62■■□□□ 1.85
TNFRSF25-208ENST00000453341 ZNF236Q9UL36 1845 aa26.62■■□□□ 1.85
TNFRSF25-208ENST00000453341 RARSP54136 660 aaKnown RBP26.61■■□□□ 1.85
TNFRSF25-208ENST00000453341 USP14P54578 494 aa26.61■■□□□ 1.85
TNFRSF25-208ENST00000453341 SNX17Q15036 470 aa26.61■■□□□ 1.85
TNFRSF25-208ENST00000453341 RAB3GAP1Q15042 981 aa26.61■■□□□ 1.85
TNFRSF25-208ENST00000453341 TRIM60Q495X7 471 aa26.61■■□□□ 1.85
TNFRSF25-208ENST00000453341 TNNI3KQ59H18 835 aa26.61■■□□□ 1.85
TNFRSF25-208ENST00000453341 PRDM6Q9NQX0 595 aa26.61■■□□□ 1.85
TNFRSF25-208ENST00000453341 FPGT-TNNI3KV9GXZ4 949 aa26.61■■□□□ 1.85
TNFRSF25-208ENST00000453341 GNAI2P04899 355 aa26.6■■□□□ 1.85
TNFRSF25-208ENST00000453341 SMAD3P84022 425 aaKnown RBP26.6■■□□□ 1.85
TNFRSF25-208ENST00000453341 CCDC158Q5M9N0 1113 aa26.6■■□□□ 1.85
TNFRSF25-208ENST00000453341 SH3RF1Q7Z6J0 888 aa26.6■■□□□ 1.85
TNFRSF25-208ENST00000453341 ARRDC4Q8NCT1 418 aa26.6■■□□□ 1.85
TNFRSF25-208ENST00000453341 ARHGAP45Q92619 1136 aa26.6■■□□□ 1.85
TNFRSF25-208ENST00000453341 RPAP3Q9H6T3 665 aaPredicted RBP26.6■■□□□ 1.85
TNFRSF25-208ENST00000453341 GPR108Q9NPR9 543 aa26.6■■□□□ 1.85
TNFRSF25-208ENST00000453341 PDLIM7Q9NR12 457 aa26.6■■□□□ 1.85
TNFRSF25-208ENST00000453341 TRIM43BA6NCK2 446 aa26.59■■□□□ 1.85
TNFRSF25-208ENST00000453341 CYP7A1P22680 504 aa26.59■■□□□ 1.85
TNFRSF25-208ENST00000453341 ADORA2AP29274 412 aa26.59■■□□□ 1.85
TNFRSF25-208ENST00000453341 OLFML2BQ68BL8 750 aa26.59■■□□□ 1.85
TNFRSF25-208ENST00000453341 TRIM43Q96BQ3 446 aaPredicted RBP26.59■■□□□ 1.85
TNFRSF25-208ENST00000453341 EHD4Q9H223 541 aa26.59■■□□□ 1.85
TNFRSF25-208ENST00000453341 SERPINB13Q9UIV8 391 aa26.59■■□□□ 1.85
TNFRSF25-208ENST00000453341 TNNQ9UQP3 1299 aa26.59■■□□□ 1.85
TNFRSF25-208ENST00000453341 KBTBD13C9JR72 458 aa26.58■■□□□ 1.85
TNFRSF25-208ENST00000453341 GUCY1A2P33402 732 aa26.58■■□□□ 1.85
TNFRSF25-208ENST00000453341 ABCB5Q2M3G0 1257 aa26.58■■□□□ 1.85
TNFRSF25-208ENST00000453341 CERKLQ49MI3 558 aaPredicted RBP26.58■■□□□ 1.85
TNFRSF25-208ENST00000453341 MIGA1Q8NAN2 632 aa26.58■■□□□ 1.85
TNFRSF25-208ENST00000453341 MOV10L1Q9BXT6 1211 aaKnown RBP26.58■■□□□ 1.85
TNFRSF25-208ENST00000453341 DPP9Q86TI2 863 aa26.57■■□□□ 1.84
TNFRSF25-208ENST00000453341 ZNF512BQ96KM6 892 aaPredicted RBP26.57■■□□□ 1.84
TNFRSF25-208ENST00000453341 SEPT4O43236 478 aa26.56■■□□□ 1.84
TNFRSF25-208ENST00000453341 IGSF3O75054 1194 aa26.56■■□□□ 1.84
TNFRSF25-208ENST00000453341 COBLO75128 1261 aa26.56■■□□□ 1.84
TNFRSF25-208ENST00000453341 MYCNP04198 464 aaPredicted RBP26.56■■□□□ 1.84
TNFRSF25-208ENST00000453341 SHMT1P34896 483 aa26.56■■□□□ 1.84
TNFRSF25-208ENST00000453341 USP5P45974 858 aa26.56■■□□□ 1.84
TNFRSF25-208ENST00000453341 FOSL2P15408 326 aa26.55■■□□□ 1.84
TNFRSF25-208ENST00000453341 ADCYAP1R1P41586 468 aa26.55■■□□□ 1.84
TNFRSF25-208ENST00000453341 FERMT2Q96AC1 680 aa26.55■■□□□ 1.84
TNFRSF25-208ENST00000453341 A0A0G2JMZ2 1700 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms