RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 USP17L13C9JLJ4 530 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 USP17L11C9JVI0 530 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 USP17L18D6R9N7 530 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 USP17L22D6RA61 530 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 USP17L17D6RBQ6 530 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 USP17L19D6RCP7 530 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 USP17L20D6RJB6 530 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 INHAP05111 366 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 CYP2D6P10635 497 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 GJA8P48165 433 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 EVX2Q03828 476 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 USP17L24Q0WX57 530 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 SEPT2Q15019 361 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 ACER1Q8TDN7 264 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 PAGR1Q9BTK6 254 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 UNC93B1Q9H1C4 597 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 TXNRD2Q9NNW7 524 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 PCDHB15Q9Y5E8 787 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 SLC4A4Q9Y6R1 1079 aa15.51■□□□□ 0.07
CHD3-206ENST00000452447 CHGBP05060 677 aa15.5■□□□□ 0.07
CHD3-206ENST00000452447 VCAM1P19320 739 aa15.5■□□□□ 0.07
CHD3-206ENST00000452447 ERVK-9P63128 1117 aa15.5■□□□□ 0.07
CHD3-206ENST00000452447 ERVK-24P63145 666 aa15.5■□□□□ 0.07
CHD3-206ENST00000452447 SLC44A5Q8NCS7 719 aa15.5■□□□□ 0.07
CHD3-206ENST00000452447 DYNLL2Q96FJ2 89 aa15.5■□□□□ 0.07
CHD3-206ENST00000452447 PUS7LQ9H0K6 701 aaKnown RBP15.5■□□□□ 0.07
CHD3-206ENST00000452447 RBPJLQ9UBG7 517 aa15.5■□□□□ 0.07
CHD3-206ENST00000452447 USP17L12C9JPN9 530 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 USP17L21D6R901 530 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 PEX10O60683 326 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 MAPK4P31152 587 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 GUCY1A2P33402 732 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 TSHZ3Q63HK5 1081 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 TMEM179Q6ZVK1 233 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 KBTBD3Q8NAB2 608 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 U2AF1L4Q8WU68 220 aaKnown RBP15.49■□□□□ 0.07
CHD3-206ENST00000452447 SHISA4Q96DD7 197 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 YTHDC1Q96MU7 727 aaKnown RBP15.49■□□□□ 0.07
CHD3-206ENST00000452447 CWC22Q9HCG8 908 aaKnown RBP15.49■□□□□ 0.07
CHD3-206ENST00000452447 GJD2Q9UKL4 321 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 Q3C1V9 767 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 C12orf60Q5U649 245 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 CATSPERGQ6ZRH7 1159 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 SOCS4Q8WXH5 440 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 NUDT12Q9BQG2 462 aa15.49■□□□□ 0.07
CHD3-206ENST00000452447 ZBTB47Q9UFB7 747 aaPredicted RBP15.49■□□□□ 0.07
CHD3-206ENST00000452447 CYP2D7A0A087X1C5 515 aa15.48■□□□□ 0.07
CHD3-206ENST00000452447 ERC2O15083 957 aa15.48■□□□□ 0.07
CHD3-206ENST00000452447 SGPL1O95470 568 aa15.48■□□□□ 0.07
CHD3-206ENST00000452447 HMGCRP04035 888 aa15.48■□□□□ 0.07
CHD3-206ENST00000452447 CCNA1P78396 465 aa15.48■□□□□ 0.07
CHD3-206ENST00000452447 LRRFIP1Q32MZ4 808 aaKnown RBP15.48■□□□□ 0.07
CHD3-206ENST00000452447 GCC1Q96CN9 775 aa15.48■□□□□ 0.07
CHD3-206ENST00000452447 CCDC17Q96LX7 622 aa15.48■□□□□ 0.07
CHD3-206ENST00000452447 RPAP3Q9H6T3 665 aaPredicted RBP15.48■□□□□ 0.07
CHD3-206ENST00000452447 RABGAP1Q9Y3P9 1069 aa15.48■□□□□ 0.07
CHD3-206ENST00000452447 TTC41PQ6P2S7 1318 aa15.47■□□□□ 0.07
CHD3-206ENST00000452447 TFRCP02786 760 aaKnown RBP15.47■□□□□ 0.07
CHD3-206ENST00000452447 ZFYP08048 801 aaPredicted RBP15.47■□□□□ 0.07
CHD3-206ENST00000452447 CYP2B6P20813 491 aa15.47■□□□□ 0.07
CHD3-206ENST00000452447 CDK8P49336 464 aa15.47■□□□□ 0.07
CHD3-206ENST00000452447 APPBP2Q92624 585 aa15.47■□□□□ 0.07
CHD3-206ENST00000452447 DEFB118Q96PH6 123 aa15.47■□□□□ 0.07
CHD3-206ENST00000452447 STRBPQ96SI9 672 aaKnown RBP15.47■□□□□ 0.07
CHD3-206ENST00000452447 PORCNQ9H237 461 aa15.47■□□□□ 0.07
CHD3-206ENST00000452447 ARHGEF10LQ9HCE6 1279 aa15.47■□□□□ 0.07
CHD3-206ENST00000452447 ARPP21Q9UBL0 812 aaPredicted RBP15.47■□□□□ 0.07
CHD3-206ENST00000452447 PLXNB2O15031 1838 aa15.46■□□□□ 0.07
CHD3-206ENST00000452447 A0A1W2PRG0 241 aa15.46■□□□□ 0.07
CHD3-206ENST00000452447 RNF113AO15541 343 aaKnown RBP15.46■□□□□ 0.07
CHD3-206ENST00000452447 AKR1B1P15121 316 aa15.46■□□□□ 0.07
CHD3-206ENST00000452447 CAPN2P17655 700 aa15.46■□□□□ 0.07
CHD3-206ENST00000452447 CTR9Q6PD62 1173 aa15.46■□□□□ 0.07
CHD3-206ENST00000452447 C16orf86Q6ZW13 317 aa15.46■□□□□ 0.07
CHD3-206ENST00000452447 GPR142Q7Z601 462 aa15.46■□□□□ 0.07
CHD3-206ENST00000452447 CRBNQ96SW2 442 aa15.46■□□□□ 0.07
CHD3-206ENST00000452447 SH2D4AQ9H788 454 aa15.46■□□□□ 0.07
CHD3-206ENST00000452447 GLRX3O76003 335 aaKnown RBP15.45■□□□□ 0.06
CHD3-206ENST00000452447 XRCC5P13010 732 aaKnown RBP15.45■□□□□ 0.06
CHD3-206ENST00000452447 ICA1Q05084 483 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 WDR78Q5VTH9 848 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 LBX2Q6XYB7 198 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 PLEKHH3Q7Z736 793 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 DPF3Q92784 378 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 OSBP2Q969R2 916 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 TANGO6Q9C0B7 1094 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 PAK6Q9NQU5 681 aaPredicted RBP15.45■□□□□ 0.06
CHD3-206ENST00000452447 HOXC10Q9NYD6 342 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 SMIM22K7EJ46 135 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 FARP2O94887 1054 aaPredicted RBP15.45■□□□□ 0.06
CHD3-206ENST00000452447 RGS2P41220 211 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 COG2Q14746 738 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 GIMAP6Q6P9H5 292 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 POTEEQ6S8J3 1075 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 TRMT44Q8IYL2 757 aaKnown RBP15.45■□□□□ 0.06
CHD3-206ENST00000452447 LPAR1Q92633 364 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 HTATIP2Q9BUP3 242 aa15.45■□□□□ 0.06
CHD3-206ENST00000452447 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHD3-206ENST00000452447 HMX1Q9NP08 348 aaPredicted RBP15.45■□□□□ 0.06
CHD3-206ENST00000452447 RPTORQ8N122 1335 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms