RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 IFIT5Q13325 482 aaKnown RBP10.03□□□□□ -0.8
LINC01961-201ENST00000449954 CCDC85BQ15834 202 aaPredicted RBP10.03□□□□□ -0.8
LINC01961-201ENST00000449954 TREML2Q5T2D2 321 aa10.03□□□□□ -0.8
LINC01961-201ENST00000449954 HHIPL2Q6UWX4 724 aa10.03□□□□□ -0.8
LINC01961-201ENST00000449954 SLF2Q8IX21 1173 aa10.03□□□□□ -0.8
LINC01961-201ENST00000449954 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
LINC01961-201ENST00000449954 LAS1LQ9Y4W2 734 aaKnown RBP10.03□□□□□ -0.8
LINC01961-201ENST00000449954 PHF20L1A8MW92 1017 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 SMIM22K7EJ46 135 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 MAPK4P31152 587 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 GYG1P46976 350 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 NHLH1Q02575 133 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 KCNC4Q03721 635 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 UBE4AQ14139 1066 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 HIC1Q14526 733 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 GRIK5Q16478 980 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 C1orf53Q5VUE5 145 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 KSR2Q6VAB6 950 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 SLC39A5Q6ZMH5 540 aa10.02□□□□□ -0.81
LINC01961-201ENST00000449954 USP34Q70CQ2 3546 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 KBTBD13C9JR72 458 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 CTNND1O60716 968 aaKnown RBP10.01□□□□□ -0.81
LINC01961-201ENST00000449954 IGFBP4P22692 258 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 FPGSQ05932 587 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 TCP10Q12799 353 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 ADGRE1Q14246 886 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 CWF19L2Q2TBE0 894 aaKnown RBP10.01□□□□□ -0.81
LINC01961-201ENST00000449954 TRIM60Q495X7 471 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 MFSD14CQ5VZR4 134 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 VPS37DQ86XT2 251 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 ARRDC4Q8NCT1 418 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 USP6NLQ92738 828 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 TRIM43Q96BQ3 446 aaPredicted RBP10.01□□□□□ -0.81
LINC01961-201ENST00000449954 FAM84BQ96KN1 310 aaPredicted RBP10.01□□□□□ -0.81
LINC01961-201ENST00000449954 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
LINC01961-201ENST00000449954 TACC3Q9Y6A5 838 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 UTYO14607 1347 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 CFAP54Q96N23 3096 aa10.01□□□□□ -0.81
LINC01961-201ENST00000449954 PI4KAP2A4QPH2 592 aa10□□□□□ -0.81
LINC01961-201ENST00000449954 FAM86C2PA6NEL3 165 aa10□□□□□ -0.81
LINC01961-201ENST00000449954 ERC2O15083 957 aa10□□□□□ -0.81
LINC01961-201ENST00000449954 FRAT2O75474 233 aaPredicted RBP10□□□□□ -0.81
LINC01961-201ENST00000449954 KCNQ1P51787 676 aa10□□□□□ -0.81
LINC01961-201ENST00000449954 CHAF1AQ13111 956 aaPredicted RBP10□□□□□ -0.81
LINC01961-201ENST00000449954 GCKRQ14397 625 aa10□□□□□ -0.81
LINC01961-201ENST00000449954 CCL14Q16627 93 aa10□□□□□ -0.81
LINC01961-201ENST00000449954 PI4KAP1Q8N8J0 262 aa10□□□□□ -0.81
LINC01961-201ENST00000449954 PBX4Q9BYU1 374 aa10□□□□□ -0.81
LINC01961-201ENST00000449954 MYH16Q9H6N6 1097 aa10□□□□□ -0.81
LINC01961-201ENST00000449954 LRRFIP2Q9Y608 721 aaKnown RBP10□□□□□ -0.81
LINC01961-201ENST00000449954 MYO9BQ13459 2157 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 LRRC37A2A6NM11 1700 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 RCCD1A6NED2 376 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 PI4K2BG5E9Z4 385 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 TULP1O00294 542 aaPredicted RBP9.99□□□□□ -0.81
LINC01961-201ENST00000449954 PLIN1O60240 522 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 CLTBP09497 229 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 RAG1P15918 1043 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 EPHB4P54760 987 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 TFF2Q03403 129 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 MORN1Q5T089 497 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 CCDC174Q6PII3 467 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 LDHAL6AQ6ZMR3 332 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 CCDC129Q6ZRS4 1044 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 SH3RF1Q7Z6J0 888 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 CCAR1Q8IX12 1150 aaKnown RBP9.99□□□□□ -0.81
LINC01961-201ENST00000449954 GPRC5AQ8NFJ5 357 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 HERVK_113Q902F9 699 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 CNNM1Q9NRU3 951 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 TRANK1O15050 2925 aa9.99□□□□□ -0.81
LINC01961-201ENST00000449954 KIAA0355O15063 1070 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 OATP04181 439 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 CASP7P55210 303 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 IRX3P78415 501 aaPredicted RBP9.98□□□□□ -0.81
LINC01961-201ENST00000449954 MAP3K10Q02779 954 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 NFIAQ12857 509 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 RAB30Q15771 203 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 CAVIN4Q5BKX8 364 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 TAF7LQ5H9L4 462 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 CCDC30Q5VVM6 783 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 GPR142Q7Z601 462 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 GTF3C2Q8WUA4 911 aaPredicted RBP9.98□□□□□ -0.81
LINC01961-201ENST00000449954 COG5Q9UP83 839 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 DAGLAQ9Y4D2 1042 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 ZDBF2Q9HCK1 2354 aa9.98□□□□□ -0.81
LINC01961-201ENST00000449954 FECHP22830 423 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 ITGB8P26012 769 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 CNGA1P29973 690 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 MAP2K5Q13163 448 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 CCDC57Q2TAC2 916 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 GJC2Q5T442 439 aaPredicted RBP9.97□□□□□ -0.81
LINC01961-201ENST00000449954 CDC42EP5Q6NZY7 148 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 FBXO33Q7Z6M2 555 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 PLEKHH3Q7Z736 793 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 GPIHBP1Q8IV16 184 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 ZNF280CQ8ND82 737 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 MBIPQ9NS73 344 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 MSRAQ9UJ68 235 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms