RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 SLC9C2Q5TAH2 1124 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 PLEKHH3Q7Z736 793 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 ACER1Q8TDN7 264 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 KIAA1683Q9H0B3 1180 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 OGDHLQ9ULD0 1010 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 CNMDO75829 334 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 POLR3DP05423 398 aaPredicted RBP18.86■□□□□ 0.61
TRA2A-203ENST00000448549 SHMT1P34896 483 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 RGS2P41220 211 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 USP14P54578 494 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 CACNB2Q08289 660 aaPredicted RBP18.86■□□□□ 0.61
TRA2A-203ENST00000448549 TTF1Q15361 905 aaPredicted RBP18.86■□□□□ 0.61
TRA2A-203ENST00000448549 CCL14Q16627 93 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 CATSPERGQ6ZRH7 1159 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 TRMT44Q8IYL2 757 aaKnown RBP18.86■□□□□ 0.61
TRA2A-203ENST00000448549 C7orf61Q8IZ16 206 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 BCL11AQ9H165 835 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 C11orf49Q9H6J7 331 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 CWC22Q9HCG8 908 aaKnown RBP18.86■□□□□ 0.61
TRA2A-203ENST00000448549 CABP5Q9NP86 173 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 RABGAP1Q9Y3P9 1069 aa18.86■□□□□ 0.61
TRA2A-203ENST00000448549 RANBP2P49792 3224 aaKnown RBP18.85■□□□□ 0.61
TRA2A-203ENST00000448549 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
TRA2A-203ENST00000448549 PDE6AP16499 860 aa18.85■□□□□ 0.61
TRA2A-203ENST00000448549 VCAM1P19320 739 aa18.85■□□□□ 0.61
TRA2A-203ENST00000448549 EVX2Q03828 476 aa18.85■□□□□ 0.61
TRA2A-203ENST00000448549 CLASRPQ8N2M8 674 aaKnown RBP18.85■□□□□ 0.61
TRA2A-203ENST00000448549 A0A1W2PPC1 479 aa18.84■□□□□ 0.61
TRA2A-203ENST00000448549 GOLIM4O00461 696 aa18.84■□□□□ 0.61
TRA2A-203ENST00000448549 CCND3P30281 292 aaPredicted RBP18.84■□□□□ 0.61
TRA2A-203ENST00000448549 GUCY1A2P33402 732 aa18.84■□□□□ 0.61
TRA2A-203ENST00000448549 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
TRA2A-203ENST00000448549 DNAJC2Q99543 621 aaKnown RBP18.84■□□□□ 0.61
TRA2A-203ENST00000448549 APBA2Q99767 749 aa18.84■□□□□ 0.61
TRA2A-203ENST00000448549 CRNKL1Q9BZJ0 848 aaKnown RBP18.84■□□□□ 0.61
TRA2A-203ENST00000448549 MCM9Q9NXL9 1143 aa18.84■□□□□ 0.61
TRA2A-203ENST00000448549 ZMYND8Q9ULU4 1186 aaPredicted RBP18.84■□□□□ 0.61
TRA2A-203ENST00000448549 DOCK3Q8IZD9 2030 aa18.83■□□□□ 0.61
TRA2A-203ENST00000448549 ZNF532Q9HCE3 1301 aa18.83■□□□□ 0.61
TRA2A-203ENST00000448549 IFIT2P09913 472 aaKnown RBP18.83■□□□□ 0.6
TRA2A-203ENST00000448549 MS4A1P11836 297 aa18.83■□□□□ 0.6
TRA2A-203ENST00000448549 CCNA1P78396 465 aa18.83■□□□□ 0.6
TRA2A-203ENST00000448549 GABPAQ06546 454 aa18.83■□□□□ 0.6
TRA2A-203ENST00000448549 MAP2K5Q13163 448 aa18.83■□□□□ 0.6
TRA2A-203ENST00000448549 SEPT2Q15019 361 aa18.83■□□□□ 0.6
TRA2A-203ENST00000448549 WDR78Q5VTH9 848 aa18.83■□□□□ 0.6
TRA2A-203ENST00000448549 RPAP2Q8IXW5 612 aaPredicted RBP18.83■□□□□ 0.6
TRA2A-203ENST00000448549 KIF1BPQ96EK5 621 aa18.83■□□□□ 0.6
TRA2A-203ENST00000448549 RPAP3Q9H6T3 665 aaPredicted RBP18.83■□□□□ 0.6
TRA2A-203ENST00000448549 MYO5AQ9Y4I1 1855 aaKnown RBP18.82■□□□□ 0.6
TRA2A-203ENST00000448549 FOCADQ5VW36 1801 aa18.82■□□□□ 0.6
TRA2A-203ENST00000448549 TCRBV5S4A2TA0A5A2 114 aa18.82■□□□□ 0.6
TRA2A-203ENST00000448549 MPHOSPH10O00566 681 aaKnown RBP18.82■□□□□ 0.6
TRA2A-203ENST00000448549 SOX1O00570 391 aaPredicted RBP18.82■□□□□ 0.6
TRA2A-203ENST00000448549 GLRX3O76003 335 aaKnown RBP18.82■□□□□ 0.6
TRA2A-203ENST00000448549 LHX8Q68G74 356 aa18.82■□□□□ 0.6
TRA2A-203ENST00000448549 SIRT2Q8IXJ6 389 aa18.82■□□□□ 0.6
TRA2A-203ENST00000448549 LCORLQ8N3X6 602 aa18.82■□□□□ 0.6
TRA2A-203ENST00000448549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.82■□□□□ 0.6
TRA2A-203ENST00000448549 SDR42E1Q8WUS8 393 aa18.82■□□□□ 0.6
TRA2A-203ENST00000448549 EDC3Q96F86 508 aaKnown RBP18.82■□□□□ 0.6
TRA2A-203ENST00000448549 BTBD7Q9P203 1132 aa18.82■□□□□ 0.6
TRA2A-203ENST00000448549 COG6Q9Y2V7 657 aa18.82■□□□□ 0.6
TRA2A-203ENST00000448549 CDK5RAP2Q96SN8 1893 aa18.82■□□□□ 0.6
TRA2A-203ENST00000448549 SZT2Q5T011 3432 aa18.81■□□□□ 0.6
TRA2A-203ENST00000448549 HMMRO75330 724 aa18.81■□□□□ 0.6
TRA2A-203ENST00000448549 SYN1P17600 705 aa18.81■□□□□ 0.6
TRA2A-203ENST00000448549 LBX2Q6XYB7 198 aa18.81■□□□□ 0.6
TRA2A-203ENST00000448549 GDF15Q99988 308 aa18.81■□□□□ 0.6
TRA2A-203ENST00000448549 DCP1AQ9NPI6 582 aaPredicted RBP18.81■□□□□ 0.6
TRA2A-203ENST00000448549 ZBTB40Q9NUA8 1239 aa18.81■□□□□ 0.6
TRA2A-203ENST00000448549 PLXNB2O15031 1838 aa18.81■□□□□ 0.6
TRA2A-203ENST00000448549 PFASO15067 1338 aa18.8■□□□□ 0.6
TRA2A-203ENST00000448549 A0A1W2PRG0 241 aa18.8■□□□□ 0.6
TRA2A-203ENST00000448549 SLC15A5A6NIM6 579 aa18.8■□□□□ 0.6
TRA2A-203ENST00000448549 SPDYE16A6NNV3 312 aaPredicted RBP18.8■□□□□ 0.6
TRA2A-203ENST00000448549 CYP2D6P10635 497 aa18.8■□□□□ 0.6
TRA2A-203ENST00000448549 PTPREP23469 700 aa18.8■□□□□ 0.6
TRA2A-203ENST00000448549 ARMT1Q9H993 441 aa18.8■□□□□ 0.6
TRA2A-203ENST00000448549 FLRT1Q9NZU1 646 aa18.8■□□□□ 0.6
TRA2A-203ENST00000448549 COL6A1P12109 1028 aa18.79■□□□□ 0.6
TRA2A-203ENST00000448549 BMP8BP34820 402 aa18.79■□□□□ 0.6
TRA2A-203ENST00000448549 SLFNL1Q499Z3 407 aa18.79■□□□□ 0.6
TRA2A-203ENST00000448549 MFSD14CQ5VZR4 134 aa18.79■□□□□ 0.6
TRA2A-203ENST00000448549 SLC44A5Q8NCS7 719 aa18.79■□□□□ 0.6
TRA2A-203ENST00000448549 LRCH3Q96II8 777 aa18.79■□□□□ 0.6
TRA2A-203ENST00000448549 DDX19BQ9UMR2 479 aa18.79■□□□□ 0.6
TRA2A-203ENST00000448549 IVNS1ABPQ9Y6Y0 642 aa18.79■□□□□ 0.6
TRA2A-203ENST00000448549 PRKAB2O43741 272 aa18.78■□□□□ 0.6
TRA2A-203ENST00000448549 RAB11FIP3O75154 756 aa18.78■□□□□ 0.6
TRA2A-203ENST00000448549 COG2Q14746 738 aa18.78■□□□□ 0.6
TRA2A-203ENST00000448549 DYNLL2Q96FJ2 89 aa18.78■□□□□ 0.6
TRA2A-203ENST00000448549 BOLA2Q9H3K6 86 aa18.78■□□□□ 0.6
TRA2A-203ENST00000448549 PAG1Q9NWQ8 432 aa18.78■□□□□ 0.6
TRA2A-203ENST00000448549 HOXC6P09630 235 aa18.77■□□□□ 0.6
TRA2A-203ENST00000448549 MAGEA10P43363 369 aaPredicted RBP18.77■□□□□ 0.6
TRA2A-203ENST00000448549 ATP2B2Q01814 1243 aa18.77■□□□□ 0.6
TRA2A-203ENST00000448549 GRB14Q14449 540 aa18.77■□□□□ 0.6
TRA2A-203ENST00000448549 NPLOC4Q8TAT6 608 aa18.77■□□□□ 0.6
TRA2A-203ENST00000448549 TANGO6Q9C0B7 1094 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms