RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 CLEC4MQ9H2X3 399 aaPredicted RBP8.27□□□□□ -1.09
USP49-205ENST00000448078 TRPM3Q9HCF6 1732 aaPredicted RBP8.26□□□□□ -1.09
USP49-205ENST00000448078 FCGRTP55899 365 aa8.26□□□□□ -1.09
USP49-205ENST00000448078 FOXD4L6Q3SYB3 417 aaPredicted RBP8.26□□□□□ -1.09
USP49-205ENST00000448078 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP49-205ENST00000448078 KIAA0319Q5VV43 1072 aa8.26□□□□□ -1.09
USP49-205ENST00000448078 FOXD4L3Q6VB84 417 aaPredicted RBP8.26□□□□□ -1.09
USP49-205ENST00000448078 ARHGEF25Q86VW2 580 aa8.26□□□□□ -1.09
USP49-205ENST00000448078 SYTL4Q96C24 671 aaPredicted RBP8.26□□□□□ -1.09
USP49-205ENST00000448078 SOX1O00570 391 aaPredicted RBP8.25□□□□□ -1.09
USP49-205ENST00000448078 TOMM70O94826 608 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 NOS3P29474 1203 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 GRIA4P48058 902 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 FDX2Q6P4F2 183 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 PI16Q6UXB8 463 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 VN1R5Q7Z5H4 357 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 UBASH3BQ8TF42 649 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 TCF12Q99081 682 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 RUSC1Q9BVN2 902 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 CEP41Q9BYV8 373 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 TPSG1Q9NRR2 321 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 KCNK4Q9NYG8 393 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 AKAP2Q9Y2D5 859 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 USP6P35125 1406 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 ATP10DQ9P241 1426 aa8.25□□□□□ -1.09
USP49-205ENST00000448078 F8W735 103 aaPredicted RBP8.24□□□□□ -1.09
USP49-205ENST00000448078 EIF4EBP3O60516 100 aaPredicted RBP8.24□□□□□ -1.09
USP49-205ENST00000448078 ESRRAP11474 423 aaPredicted RBP8.24□□□□□ -1.09
USP49-205ENST00000448078 YBX3P16989 372 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP49-205ENST00000448078 GRM2Q14416 872 aa8.24□□□□□ -1.09
USP49-205ENST00000448078 ENOX2Q16206 610 aaKnown RBP8.24□□□□□ -1.09
USP49-205ENST00000448078 ALG1LQ6GMV1 187 aa8.24□□□□□ -1.09
USP49-205ENST00000448078 NLGN2Q8NFZ4 835 aa8.24□□□□□ -1.09
USP49-205ENST00000448078 SEMA6BQ9H3T3 888 aa8.24□□□□□ -1.09
USP49-205ENST00000448078 GPN3Q9UHW5 284 aaPredicted RBP8.24□□□□□ -1.09
USP49-205ENST00000448078 MYOM1P52179 1685 aa8.24□□□□□ -1.09
USP49-205ENST00000448078 UTRNP46939 3433 aa8.23□□□□□ -1.09
USP49-205ENST00000448078 RGPD3A6NKT7 1758 aaPredicted RBP8.23□□□□□ -1.09
USP49-205ENST00000448078 RGPD4Q7Z3J3 1758 aa8.23□□□□□ -1.09
USP49-205ENST00000448078 K7ELQ4 463 aaPredicted RBP8.23□□□□□ -1.09
USP49-205ENST00000448078 WISP1O95388 367 aa8.23□□□□□ -1.09
USP49-205ENST00000448078 LDHBP07195 334 aaKnown RBP8.23□□□□□ -1.09
USP49-205ENST00000448078 ZNF157P51786 506 aaPredicted RBP8.23□□□□□ -1.09
USP49-205ENST00000448078 ZNF827Q17R98 1081 aa8.23□□□□□ -1.09
USP49-205ENST00000448078 CCDC27Q2M243 656 aa8.23□□□□□ -1.09
USP49-205ENST00000448078 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
USP49-205ENST00000448078 CORO1BQ9BR76 489 aa8.23□□□□□ -1.09
USP49-205ENST00000448078 BCO2Q9BYV7 579 aa8.23□□□□□ -1.09
USP49-205ENST00000448078 SPG7Q9UQ90 795 aa8.23□□□□□ -1.09
USP49-205ENST00000448078 PARP4Q9UKK3 1724 aaKnown RBP8.23□□□□□ -1.09
USP49-205ENST00000448078 CASZ1Q86V15 1759 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 PPIP5K1Q6PFW1 1433 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 TMEM238LA0A1B0GVL6 79 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 ANKRD33BA6NCL7 494 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 GAS2O43903 313 aaKnown RBP8.22□□□□□ -1.09
USP49-205ENST00000448078 CYP11A1P05108 521 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 PRELPP51888 382 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 DSC3Q14574 896 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.22□□□□□ -1.09
USP49-205ENST00000448078 FOXD4L4Q8WXT5 416 aaPredicted RBP8.22□□□□□ -1.09
USP49-205ENST00000448078 RNF208Q9H0X6 261 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 RAD18Q9NS91 495 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 CCNL1Q9UK58 526 aaPredicted RBP8.22□□□□□ -1.09
USP49-205ENST00000448078 EVC2Q86UK5 1308 aa8.22□□□□□ -1.09
USP49-205ENST00000448078 CENPJQ9HC77 1338 aaPredicted RBP8.22□□□□□ -1.09
USP49-205ENST00000448078 IGHA2P01877 340 aa8.21□□□□□ -1.1
USP49-205ENST00000448078 HP1BP3Q5SSJ5 553 aaPredicted RBP8.21□□□□□ -1.1
USP49-205ENST00000448078 NXPE4Q6UWF7 544 aa8.21□□□□□ -1.1
USP49-205ENST00000448078 TMEM130Q8N3G9 435 aa8.21□□□□□ -1.1
USP49-205ENST00000448078 ZFYVE1Q9HBF4 777 aa8.21□□□□□ -1.1
USP49-205ENST00000448078 PNPLA7Q6ZV29 1317 aa8.21□□□□□ -1.1
USP49-205ENST00000448078 TTC21AQ8NDW8 1320 aa8.21□□□□□ -1.1
USP49-205ENST00000448078 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 ADAM11O75078 769 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 P4HBP07237 508 aaKnown RBP8.2□□□□□ -1.1
USP49-205ENST00000448078 FGD1P98174 961 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 HNRNPUQ00839 825 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP49-205ENST00000448078 PPP2R3AQ06190 1150 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 FMR1Q06787 632 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP49-205ENST00000448078 PDE3AQ14432 1141 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 EAPPQ56P03 285 aaPredicted RBP8.2□□□□□ -1.1
USP49-205ENST00000448078 DNAJC5GQ8N7S2 189 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 C12orf50Q8NA57 414 aaPredicted RBP8.2□□□□□ -1.1
USP49-205ENST00000448078 FBF1Q8TES7 1133 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 UTP4Q969X6 686 aaKnown RBP8.2□□□□□ -1.1
USP49-205ENST00000448078 MEGF10Q96KG7 1140 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 KCNF1Q9H3M0 494 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 ZNF576Q9H609 170 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 WWC3Q9ULE0 1092 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 ITSN1Q15811 1721 aa8.2□□□□□ -1.1
USP49-205ENST00000448078 POU4F3Q15319 338 aa8.19□□□□□ -1.1
USP49-205ENST00000448078 PRPF40BQ6NWY9 871 aaKnown RBP8.19□□□□□ -1.1
USP49-205ENST00000448078 COL23A1Q86Y22 540 aaPredicted RBP8.19□□□□□ -1.1
USP49-205ENST00000448078 SOX17Q9H6I2 414 aaPredicted RBP8.19□□□□□ -1.1
USP49-205ENST00000448078 CYP4F12Q9HCS2 524 aa8.19□□□□□ -1.1
USP49-205ENST00000448078 ABCB6Q9NP58 842 aa8.19□□□□□ -1.1
USP49-205ENST00000448078 TTC21BQ7Z4L5 1316 aa8.19□□□□□ -1.1
USP49-205ENST00000448078 MAOBP27338 520 aa8.18□□□□□ -1.1
USP49-205ENST00000448078 FSTL1Q12841 308 aa8.18□□□□□ -1.1
USP49-205ENST00000448078 ZNF423Q2M1K9 1284 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms