RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
VSTM1-206ENST00000447872 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
VSTM1-206ENST00000447872 NDUFB9Q9Y6M9 179 aa12.58□□□□□ -0.4
VSTM1-206ENST00000447872 DOCK1Q14185 1865 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 MAGEB6P1A0A0J9YX57 407 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP17L15C9J2P7 530 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP17L13C9JLJ4 530 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP17L11C9JVI0 530 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP17L18D6R9N7 530 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP17L22D6RA61 530 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP17L17D6RBQ6 530 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP17L19D6RCP7 530 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP17L20D6RJB6 530 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 COL9A1P20849 921 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP14P54578 494 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 USP17L24Q0WX57 530 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 TRIM32Q13049 653 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 ABCB5Q2M3G0 1257 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 Q3C1V9 767 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 PLEKHH3Q7Z736 793 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 TRIB2Q92519 343 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 IPO9Q96P70 1041 aaKnown RBP12.57□□□□□ -0.4
VSTM1-206ENST00000447872 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 KIAA1683Q9H0B3 1180 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 IL1RAPL2Q9NP60 686 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 CABP5Q9NP86 173 aa12.57□□□□□ -0.4
VSTM1-206ENST00000447872 SPTBN5Q9NRC6 3674 aaKnown RBP12.57□□□□□ -0.4
VSTM1-206ENST00000447872 GLRX3O76003 335 aaKnown RBP12.56□□□□□ -0.4
VSTM1-206ENST00000447872 IGHDP01880 384 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
VSTM1-206ENST00000447872 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
VSTM1-206ENST00000447872 ZKSCAN1P17029 563 aaPredicted RBP12.56□□□□□ -0.4
VSTM1-206ENST00000447872 RGS2P41220 211 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 CCNA1P78396 465 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
VSTM1-206ENST00000447872 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 MAP3K21Q5TCX8 1036 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 GPR142Q7Z601 462 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 CLASRPQ8N2M8 674 aaKnown RBP12.56□□□□□ -0.4
VSTM1-206ENST00000447872 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 DIS3LQ8TF46 1054 aaKnown RBP12.56□□□□□ -0.4
VSTM1-206ENST00000447872 C12orf42Q96LP6 360 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
VSTM1-206ENST00000447872 PORCNQ9H237 461 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 PRO3102Q9H379 93 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 STXBP5LQ9Y2K9 1186 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 RABGAP1Q9Y3P9 1069 aa12.56□□□□□ -0.4
VSTM1-206ENST00000447872 A0A1W2PPC1 479 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 APBB1O00213 710 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 HMMRO75330 724 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 IFIT2P09913 472 aaKnown RBP12.55□□□□□ -0.4
VSTM1-206ENST00000447872 PDE6AP16499 860 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 PLCD1P51178 756 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 MORN1Q5T089 497 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.55□□□□□ -0.4
VSTM1-206ENST00000447872 RPAP2Q8IXW5 612 aaPredicted RBP12.55□□□□□ -0.4
VSTM1-206ENST00000447872 USP6NLQ92738 828 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 KIF1BPQ96EK5 621 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
VSTM1-206ENST00000447872 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 STAP2Q9UGK3 403 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 OGDHLQ9ULD0 1010 aa12.55□□□□□ -0.4
VSTM1-206ENST00000447872 VCAM1P19320 739 aa12.54□□□□□ -0.4
VSTM1-206ENST00000447872 SHMT1P34896 483 aa12.54□□□□□ -0.4
VSTM1-206ENST00000447872 CACNB2Q08289 660 aaPredicted RBP12.54□□□□□ -0.4
VSTM1-206ENST00000447872 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
VSTM1-206ENST00000447872 C7orf61Q8IZ16 206 aa12.54□□□□□ -0.4
VSTM1-206ENST00000447872 ACER1Q8TDN7 264 aa12.54□□□□□ -0.4
VSTM1-206ENST00000447872 APBA2Q99767 749 aa12.54□□□□□ -0.4
VSTM1-206ENST00000447872 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
VSTM1-206ENST00000447872 MCM9Q9NXL9 1143 aa12.54□□□□□ -0.4
VSTM1-206ENST00000447872 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 GOLIM4O00461 696 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 MPHOSPH10O00566 681 aaKnown RBP12.53□□□□□ -0.4
VSTM1-206ENST00000447872 SOX1O00570 391 aaPredicted RBP12.53□□□□□ -0.4
VSTM1-206ENST00000447872 RAB11FIP3O75154 756 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 PLA2G5P39877 138 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 MAP2K5Q13163 448 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 CCL14Q16627 93 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 WDR78Q5VTH9 848 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 MFSD14CQ5VZR4 134 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.53□□□□□ -0.4
VSTM1-206ENST00000447872 EDC3Q96F86 508 aaKnown RBP12.53□□□□□ -0.4
VSTM1-206ENST00000447872 LRCH3Q96II8 777 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
VSTM1-206ENST00000447872 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
VSTM1-206ENST00000447872 ZNF532Q9HCE3 1301 aa12.53□□□□□ -0.4
VSTM1-206ENST00000447872 SLC15A5A6NIM6 579 aa12.52□□□□□ -0.41
VSTM1-206ENST00000447872 CNMDO75829 334 aa12.52□□□□□ -0.41
VSTM1-206ENST00000447872 GABPAQ06546 454 aa12.52□□□□□ -0.41
VSTM1-206ENST00000447872 SEPT2Q15019 361 aa12.52□□□□□ -0.41
VSTM1-206ENST00000447872 LBX2Q6XYB7 198 aa12.52□□□□□ -0.41
VSTM1-206ENST00000447872 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.41
VSTM1-206ENST00000447872 ZBTB40Q9NUA8 1239 aa12.52□□□□□ -0.41
VSTM1-206ENST00000447872 HOXC10Q9NYD6 342 aa12.52□□□□□ -0.41
VSTM1-206ENST00000447872 ZMYND8Q9ULU4 1186 aaPredicted RBP12.52□□□□□ -0.41
VSTM1-206ENST00000447872 DDX19BQ9UMR2 479 aa12.52□□□□□ -0.41
VSTM1-206ENST00000447872 IVNS1ABPQ9Y6Y0 642 aa12.52□□□□□ -0.41
VSTM1-206ENST00000447872 LOC285556D6RIA3 1793 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms