RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CAP2P40123 477 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 NT5C2P49902 561 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 EVX2Q03828 476 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 TAF1CQ15572 869 aaPredicted RBP13.7□□□□□ -0.22
LINC00408-201ENST00000447784 ABCB5Q2M3G0 1257 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 CREB3L3Q68CJ9 461 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 RALYLQ86SE5 291 aaKnown RBP13.7□□□□□ -0.22
LINC00408-201ENST00000447784 ANKRD23Q86SG2 305 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 ESR2Q92731 530 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 KRT23Q9C075 422 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 AFG3L2Q9Y4W6 797 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 ZHX2Q9Y6X8 837 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 LAMB1P07942 1786 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 ROBO3Q96MS0 1386 aa13.7□□□□□ -0.22
LINC00408-201ENST00000447784 TSPY2A6NKD2 308 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 ASNSP08243 561 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 CYP21A2P08686 494 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 SHMT1P34896 483 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 HSPA4P34932 840 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 KRT32Q14532 448 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
LINC00408-201ENST00000447784 TBC1D10CQ8IV04 446 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 DNAJC18Q9H819 358 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 GINM1Q9NU53 330 aa13.69□□□□□ -0.22
LINC00408-201ENST00000447784 A0A0G2JLL6 359 aaPredicted RBP13.68□□□□□ -0.22
LINC00408-201ENST00000447784 SMIM22K7EJ46 135 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 ORC4O43929 436 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 TLR2O60603 784 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 GDF11O95390 407 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 GH2P01242 217 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 TSPY3P0CV98 308 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 TSPY8P0CW00 308 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 TFAP4Q01664 338 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 SP3Q02447 781 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 MOGSQ13724 837 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 TMEM179Q6ZVK1 233 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 FASTKD5Q7L8L6 764 aaKnown RBP13.68□□□□□ -0.22
LINC00408-201ENST00000447784 PRRT2Q7Z6L0 340 aaPredicted RBP13.68□□□□□ -0.22
LINC00408-201ENST00000447784 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
LINC00408-201ENST00000447784 E7EWF7 191 aa13.67□□□□□ -0.22
LINC00408-201ENST00000447784 SEC24BO95487 1268 aa13.67□□□□□ -0.22
LINC00408-201ENST00000447784 RASA1P20936 1047 aa13.67□□□□□ -0.22
LINC00408-201ENST00000447784 RAB3GAP1Q15042 981 aa13.67□□□□□ -0.22
LINC00408-201ENST00000447784 PPP4R3BQ5MIZ7 849 aa13.67□□□□□ -0.22
LINC00408-201ENST00000447784 INCENPQ9NQS7 918 aa13.67□□□□□ -0.22
LINC00408-201ENST00000447784 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
LINC00408-201ENST00000447784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC00408-201ENST00000447784 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 PDHXO00330 501 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 KDM4AO75164 1064 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 FGRP09769 529 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 AKR1B1P15121 316 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 PSMA5P28066 241 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 RRP1BQ14684 758 aaKnown RBP13.66□□□□□ -0.22
LINC00408-201ENST00000447784 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 FAM47AQ5JRC9 791 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 GPAT2Q6NUI2 795 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 IQCA1Q86XH1 822 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 BACH2Q9BYV9 841 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 KANSL2Q9H9L4 492 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 AS3MTQ9HBK9 375 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 ZBTB21Q9ULJ3 1066 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 SLC45A1Q9Y2W3 748 aa13.66□□□□□ -0.22
LINC00408-201ENST00000447784 B4E1Z4 1266 aa13.65□□□□□ -0.22
LINC00408-201ENST00000447784 HMGB1P09429 215 aaKnown RBP13.65□□□□□ -0.22
LINC00408-201ENST00000447784 ATP2B2Q01814 1243 aa13.65□□□□□ -0.22
LINC00408-201ENST00000447784 SART3Q15020 963 aaKnown RBP13.65□□□□□ -0.22
LINC00408-201ENST00000447784 ARHGEF6Q15052 776 aa13.65□□□□□ -0.22
LINC00408-201ENST00000447784 TSGA10IPQ3SY00 556 aa13.65□□□□□ -0.22
LINC00408-201ENST00000447784 FBXO46Q6PJ61 603 aaPredicted RBP13.65□□□□□ -0.22
LINC00408-201ENST00000447784 ZNF280CQ8ND82 737 aa13.65□□□□□ -0.22
LINC00408-201ENST00000447784 NEDD1Q8NHV4 660 aa13.65□□□□□ -0.22
LINC00408-201ENST00000447784 NEK1Q96PY6 1258 aa13.65□□□□□ -0.22
LINC00408-201ENST00000447784 FEZ1Q99689 392 aa13.65□□□□□ -0.22
LINC00408-201ENST00000447784 WDR18Q9BV38 432 aa13.65□□□□□ -0.22
LINC00408-201ENST00000447784 NEDD4P46934 1319 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 ERICH2A1L162 156 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 MCM5P33992 734 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 SPP2Q13103 211 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 SEPT2Q15019 361 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 C17orf99Q6UX52 265 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 OTOP1Q7RTM1 612 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 PROCA1Q8NCQ7 364 aaPredicted RBP13.64□□□□□ -0.23
LINC00408-201ENST00000447784 CD99L2Q8TCZ2 262 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 KCNB2Q92953 911 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 JAKMIP1Q96N16 626 aaKnown RBP13.64□□□□□ -0.23
LINC00408-201ENST00000447784 PARK7Q99497 189 aaKnown RBP13.64□□□□□ -0.23
LINC00408-201ENST00000447784 C22orf23Q9BZE7 217 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 ARHGEF10LQ9HCE6 1279 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms