RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 LSG1Q9H089 658 aaKnown RBP21.61■■□□□ 1.05
PHTF1-207ENST00000446739 ZCCHC17Q9NP64 241 aaKnown RBP21.61■■□□□ 1.05
PHTF1-207ENST00000446739 SAGE1Q9NXZ1 904 aa21.61■■□□□ 1.05
PHTF1-207ENST00000446739 PLIN4Q96Q06 1357 aa21.61■■□□□ 1.05
PHTF1-207ENST00000446739 HSPA1AP0DMV8 641 aaKnown RBP21.6■■□□□ 1.05
PHTF1-207ENST00000446739 HSPA1BP0DMV9 641 aaKnown RBP21.6■■□□□ 1.05
PHTF1-207ENST00000446739 NT5C2P49902 561 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 ICA1Q05084 483 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 MTMR2Q13614 643 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 MOGSQ13724 837 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 MFSD6Q6ZSS7 791 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 PROCA1Q8NCQ7 364 aaPredicted RBP21.6■■□□□ 1.05
PHTF1-207ENST00000446739 FEZ1Q99689 392 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 NBPF3Q9H094 633 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 KANSL2Q9H9L4 492 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 ANO2Q9NQ90 1003 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 GTF3C3Q9Y5Q9 886 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 TACC3Q9Y6A5 838 aa21.6■■□□□ 1.05
PHTF1-207ENST00000446739 BTBD19C9JJ37 291 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 TSPY3P0CV98 308 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 TSPY8P0CW00 308 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 GADL1Q6ZQY3 521 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 ANKRD23Q86SG2 305 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 TBC1D10CQ8IV04 446 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 NEDD1Q8NHV4 660 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.59■■□□□ 1.05
PHTF1-207ENST00000446739 ARHGEF10LQ9HCE6 1279 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 TOMM22Q9NS69 142 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 RNF186Q9NXI6 227 aa21.59■■□□□ 1.05
PHTF1-207ENST00000446739 TSPY2A6NKD2 308 aa21.58■■□□□ 1.05
PHTF1-207ENST00000446739 USP14P54578 494 aa21.58■■□□□ 1.05
PHTF1-207ENST00000446739 HMGCS2P54868 508 aa21.58■■□□□ 1.05
PHTF1-207ENST00000446739 TFAP4Q01664 338 aa21.58■■□□□ 1.05
PHTF1-207ENST00000446739 ACER1Q8TDN7 264 aa21.58■■□□□ 1.05
PHTF1-207ENST00000446739 KIAA1683Q9H0B3 1180 aa21.58■■□□□ 1.05
PHTF1-207ENST00000446739 SH2D4AQ9H788 454 aa21.58■■□□□ 1.05
PHTF1-207ENST00000446739 INCENPQ9NQS7 918 aa21.58■■□□□ 1.05
PHTF1-207ENST00000446739 TMOD4Q9NZQ9 345 aa21.58■■□□□ 1.05
PHTF1-207ENST00000446739 RBM8AQ9Y5S9 174 aaKnown RBP21.58■■□□□ 1.05
PHTF1-207ENST00000446739 IGKV6D-41A0A0C4DH26 115 aa21.57■■□□□ 1.04
PHTF1-207ENST00000446739 RANBP6O60518 1105 aaKnown RBP21.57■■□□□ 1.04
PHTF1-207ENST00000446739 TRPA1O75762 1119 aa21.57■■□□□ 1.04
PHTF1-207ENST00000446739 FAM47AQ5JRC9 791 aa21.57■■□□□ 1.04
PHTF1-207ENST00000446739 RRP12Q5JTH9 1297 aaKnown RBP21.57■■□□□ 1.04
PHTF1-207ENST00000446739 USP17L2Q6R6M4 530 aa21.57■■□□□ 1.04
PHTF1-207ENST00000446739 FAM43AQ8N2R8 423 aa21.57■■□□□ 1.04
PHTF1-207ENST00000446739 CFHR5Q9BXR6 569 aa21.57■■□□□ 1.04
PHTF1-207ENST00000446739 CYP21A2P08686 494 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 PPP4R3BQ5MIZ7 849 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 GPAT2Q6NUI2 795 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 CLEC10AQ8IUN9 316 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 C12orf42Q96LP6 360 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 CNNM2Q9H8M5 875 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 NYAP2Q9P242 653 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 AGTPBP1Q9UPW5 1226 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 SLC45A1Q9Y2W3 748 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 TMX2Q9Y320 296 aa21.56■■□□□ 1.04
PHTF1-207ENST00000446739 A0A1W2PRG0 241 aa21.55■■□□□ 1.04
PHTF1-207ENST00000446739 EEF2P13639 858 aaKnown RBP21.55■■□□□ 1.04
PHTF1-207ENST00000446739 SIAH1Q8IUQ4 282 aa21.55■■□□□ 1.04
PHTF1-207ENST00000446739 ESR2Q92731 530 aa21.55■■□□□ 1.04
PHTF1-207ENST00000446739 NEDD4P46934 1319 aa21.55■■□□□ 1.04
PHTF1-207ENST00000446739 PDHXO00330 501 aa21.54■■□□□ 1.04
PHTF1-207ENST00000446739 FOXN1O15353 648 aa21.54■■□□□ 1.04
PHTF1-207ENST00000446739 REC8O95072 547 aa21.54■■□□□ 1.04
PHTF1-207ENST00000446739 ATP2B2Q01814 1243 aa21.54■■□□□ 1.04
PHTF1-207ENST00000446739 PABPC4Q13310 644 aaKnown RBP eCLIP21.54■■□□□ 1.04
PHTF1-207ENST00000446739 TAF1CQ15572 869 aaPredicted RBP21.54■■□□□ 1.04
PHTF1-207ENST00000446739 ZYXQ15942 572 aaKnown RBP21.54■■□□□ 1.04
PHTF1-207ENST00000446739 CEP95Q96GE4 821 aa21.54■■□□□ 1.04
PHTF1-207ENST00000446739 KRT23Q9C075 422 aa21.54■■□□□ 1.04
PHTF1-207ENST00000446739 EMILIN3Q9NT22 766 aa21.54■■□□□ 1.04
PHTF1-207ENST00000446739 MTMR4Q9NYA4 1195 aa21.54■■□□□ 1.04
PHTF1-207ENST00000446739 TTLL1O95922 423 aa21.53■■□□□ 1.04
PHTF1-207ENST00000446739 CTCFP49711 727 aaPredicted RBP21.53■■□□□ 1.04
PHTF1-207ENST00000446739 DGKZQ13574 1117 aa21.53■■□□□ 1.04
PHTF1-207ENST00000446739 ZFYVE28Q9HCC9 887 aa21.53■■□□□ 1.04
PHTF1-207ENST00000446739 TCP11L1Q9NUJ3 509 aa21.53■■□□□ 1.04
PHTF1-207ENST00000446739 SYNPO2Q9UMS6 1093 aa21.53■■□□□ 1.04
PHTF1-207ENST00000446739 CASP8AP2Q9UKL3 1982 aa21.53■■□□□ 1.04
PHTF1-207ENST00000446739 TRDNQ13061 729 aa21.52■■□□□ 1.04
PHTF1-207ENST00000446739 NECTIN1Q15223 517 aa21.52■■□□□ 1.04
PHTF1-207ENST00000446739 TREML2Q5T2D2 321 aa21.52■■□□□ 1.04
PHTF1-207ENST00000446739 LPAR1Q92633 364 aa21.52■■□□□ 1.04
PHTF1-207ENST00000446739 MKL1Q969V6 931 aa21.52■■□□□ 1.04
PHTF1-207ENST00000446739 PARK7Q99497 189 aaKnown RBP21.52■■□□□ 1.04
PHTF1-207ENST00000446739 VCPKMTQ9H867 229 aa21.52■■□□□ 1.04
PHTF1-207ENST00000446739 PNMA3Q9UL41 463 aa21.52■■□□□ 1.04
PHTF1-207ENST00000446739 SLC27A2O14975 620 aa21.51■■□□□ 1.03
PHTF1-207ENST00000446739 TBC1D8O95759 1140 aa21.51■■□□□ 1.03
PHTF1-207ENST00000446739 HOXA7P31268 230 aaPredicted RBP21.51■■□□□ 1.03
PHTF1-207ENST00000446739 CRHR2Q13324 411 aa21.51■■□□□ 1.03
PHTF1-207ENST00000446739 RNF20Q5VTR2 975 aa21.51■■□□□ 1.03
PHTF1-207ENST00000446739 CREB3L3Q68CJ9 461 aa21.51■■□□□ 1.03
PHTF1-207ENST00000446739 GOPCQ9HD26 462 aa21.51■■□□□ 1.03
PHTF1-207ENST00000446739 IL17RBQ9NRM6 502 aa21.51■■□□□ 1.03
PHTF1-207ENST00000446739 CLIP2Q9UDT6 1046 aa21.51■■□□□ 1.03
PHTF1-207ENST00000446739 B4E1Z4 1266 aa21.5■■□□□ 1.03
PHTF1-207ENST00000446739 EPB41L2O43491 1005 aaKnown RBP21.5■■□□□ 1.03
PHTF1-207ENST00000446739 KDM4AO75164 1064 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms