RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 BAHD1Q8TBE0 780 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P48-201ENST00000446155 XAGE3Q8WTP9 111 aa6.9□□□□□ -1.3
HMGB1P48-201ENST00000446155 CCDC74BQ96LY2 380 aa6.9□□□□□ -1.3
HMGB1P48-201ENST00000446155 SLC9A7Q96T83 725 aa6.9□□□□□ -1.3
HMGB1P48-201ENST00000446155 U3KQE9 123 aa6.9□□□□□ -1.3
HMGB1P48-201ENST00000446155 RBAK-RBAKDNI3L0D1 243 aa6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 K7ELQ4 463 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 POLR2BP30876 1174 aaKnown RBP6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 CCNFP41002 786 aa6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 CYP27A1Q02318 531 aa6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 C22orf34Q6ZV56 151 aa6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 SREK1Q8WXA9 508 aaKnown RBP6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 VWCEQ96DN2 955 aa6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 KIF2CQ99661 725 aa6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 METTL22Q9BUU2 404 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 ZNF408Q9H9D4 720 aa6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 CEP131Q9UPN4 1083 aa6.89□□□□□ -1.31
HMGB1P48-201ENST00000446155 IGF2BP3O00425 579 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGB1P48-201ENST00000446155 RAG1P15918 1043 aa6.88□□□□□ -1.31
HMGB1P48-201ENST00000446155 GUCY2CP25092 1073 aa6.88□□□□□ -1.31
HMGB1P48-201ENST00000446155 ETFBP38117 255 aa6.88□□□□□ -1.31
HMGB1P48-201ENST00000446155 CASP7P55210 303 aa6.88□□□□□ -1.31
HMGB1P48-201ENST00000446155 ZYXQ15942 572 aaKnown RBP6.88□□□□□ -1.31
HMGB1P48-201ENST00000446155 CYP27C1Q4G0S4 372 aa6.88□□□□□ -1.31
HMGB1P48-201ENST00000446155 CDH24Q86UP0 819 aa6.88□□□□□ -1.31
HMGB1P48-201ENST00000446155 TANGO6Q9C0B7 1094 aa6.88□□□□□ -1.31
HMGB1P48-201ENST00000446155 ADAM23O75077 832 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 SSBP05455 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 CPLX3Q8WVH0 158 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 ARMC5Q96C12 935 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 ANAPC16Q96DE5 110 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 CRBNQ96SW2 442 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 OSBPL1AQ9BXW6 950 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 ATG3Q9NT62 314 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 PRKAG3Q9UGI9 489 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 MAPK8IP1Q9UQF2 711 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 MRVI1Q9Y6F6 885 aa6.87□□□□□ -1.31
HMGB1P48-201ENST00000446155 LTBP3Q9NS15 1303 aa6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 A0A1W2PQH9 124 aa6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 ZNF865P0CJ78 1059 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 ETV3P41162 512 aa6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 SF3A1Q15459 793 aaKnown RBP6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 DUSP27Q5VZP5 1158 aa6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 UNC5AQ6ZN44 842 aa6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 TMEM192Q8IY95 271 aa6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 PHACTR4Q8IZ21 702 aa6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 MKNK2Q9HBH9 465 aa6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 PIM2Q9P1W9 311 aa6.86□□□□□ -1.31
HMGB1P48-201ENST00000446155 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 TGFB1P01137 390 aa6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 FOSL1P15407 271 aa6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 OXCT1P55809 520 aa6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 ZNF746Q6NUN9 644 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 TTC6Q86TZ1 520 aa6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 COX4I2Q96KJ9 171 aa6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 KREMEN1Q96MU8 473 aa6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 TNKS2Q9H2K2 1166 aa6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 PRDM5Q9NQX1 630 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 GTF2IRD1Q9UHL9 959 aa6.85□□□□□ -1.31
HMGB1P48-201ENST00000446155 KLF4O43474 513 aa6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 ATP2B1P20020 1258 aa6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 MSMPQ1L6U9 139 aa6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 SFRP5Q5T4F7 317 aa6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 Q96M66 194 aa6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 FBXL18Q96ME1 805 aa6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 ASPNQ9BXN1 380 aa6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 RNF112Q9ULX5 631 aa6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 LEMD3Q9Y2U8 911 aa6.84□□□□□ -1.31
HMGB1P48-201ENST00000446155 PRR33A8MZF0 331 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 HOXA10P31260 410 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 GBP1P32455 592 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 KIR3DL1P43629 444 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 RBL2Q08999 1139 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 NKPD1Q17RQ9 610 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 TNNI3KQ59H18 835 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 NBPF12Q5TAG4 269 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 PPFIBP1Q86W92 1011 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 FAM181AQ8N9Y4 354 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 SLC6A18Q96N87 628 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 SUCOQ9UBS9 1254 aaKnown RBP6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 ZNF214Q9UL59 606 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 TPX2Q9ULW0 747 aaKnown RBP6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 PLAGL2Q9UPG8 496 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 CAPN6Q9Y6Q1 641 aa6.83□□□□□ -1.32
HMGB1P48-201ENST00000446155 CYP26A1O43174 497 aa6.82□□□□□ -1.32
HMGB1P48-201ENST00000446155 HMGB1P09429 215 aaKnown RBP6.82□□□□□ -1.32
HMGB1P48-201ENST00000446155 CYP7A1P22680 504 aa6.82□□□□□ -1.32
HMGB1P48-201ENST00000446155 SPACA3Q8IXA5 215 aa6.82□□□□□ -1.32
HMGB1P48-201ENST00000446155 DHX38Q92620 1227 aaKnown RBP6.82□□□□□ -1.32
HMGB1P48-201ENST00000446155 ZC3H7BQ9UGR2 993 aaKnown RBP6.82□□□□□ -1.32
HMGB1P48-201ENST00000446155 SLC12A7Q9Y666 1083 aa6.82□□□□□ -1.32
HMGB1P48-201ENST00000446155 C9IYK1 514 aa6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 CLEC3AO75596 197 aa6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 STK10O94804 968 aaKnown RBP6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 MED26O95402 600 aa6.81□□□□□ -1.32
HMGB1P48-201ENST00000446155 CEACAM5P06731 702 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms