RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 CERKLQ49MI3 558 aaPredicted RBP17.26■□□□□ 0.35
SMARCAL1-210ENST00000445153 LHX8Q68G74 356 aa17.26■□□□□ 0.35
SMARCAL1-210ENST00000445153 CATSPERGQ6ZRH7 1159 aa17.26■□□□□ 0.35
SMARCAL1-210ENST00000445153 PLEKHH3Q7Z736 793 aa17.26■□□□□ 0.35
SMARCAL1-210ENST00000445153 SOCS4Q8WXH5 440 aa17.26■□□□□ 0.35
SMARCAL1-210ENST00000445153 C11orf49Q9H6J7 331 aa17.26■□□□□ 0.35
SMARCAL1-210ENST00000445153 PFASO15067 1338 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 DDX60LQ5H9U9 1706 aaKnown RBP17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 A0A1W2PPC1 479 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP17L15C9J2P7 530 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP17L13C9JLJ4 530 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP17L11C9JVI0 530 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP17L18D6R9N7 530 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP17L22D6RA61 530 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP17L17D6RBQ6 530 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP17L19D6RCP7 530 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP17L20D6RJB6 530 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 SYN1P17600 705 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP17L24Q0WX57 530 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 ABCB5Q2M3G0 1257 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 TTC6Q86TZ1 520 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 RHPN1Q8TCX5 695 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 KIAA1683Q9H0B3 1180 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 FLRT1Q9NZU1 646 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 BTBD7Q9P203 1132 aa17.25■□□□□ 0.35
SMARCAL1-210ENST00000445153 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
SMARCAL1-210ENST00000445153 VCAM1P19320 739 aa17.24■□□□□ 0.35
SMARCAL1-210ENST00000445153 RGS2P41220 211 aa17.24■□□□□ 0.35
SMARCAL1-210ENST00000445153 GABPAQ06546 454 aa17.24■□□□□ 0.35
SMARCAL1-210ENST00000445153 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
SMARCAL1-210ENST00000445153 FEZ1Q99689 392 aa17.24■□□□□ 0.35
SMARCAL1-210ENST00000445153 RABGAP1Q9Y3P9 1069 aa17.24■□□□□ 0.35
SMARCAL1-210ENST00000445153 MAGEB6P1A0A0J9YX57 407 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 COL6A1P12109 1028 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 PDE6AP16499 860 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 MAP2K5Q13163 448 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 SEPT2Q15019 361 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 CERS3Q8IU89 383 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 CCAR1Q8IX12 1150 aaKnown RBP17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 SIRT2Q8IXJ6 389 aa17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 GTF3C2Q8WUA4 911 aaPredicted RBP17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 EDC3Q96F86 508 aaKnown RBP17.23■□□□□ 0.35
SMARCAL1-210ENST00000445153 TCRBV5S4A2TA0A5A2 114 aa17.22■□□□□ 0.35
SMARCAL1-210ENST00000445153 APBB1O00213 710 aa17.22■□□□□ 0.35
SMARCAL1-210ENST00000445153 CYP2D6P10635 497 aa17.22■□□□□ 0.35
SMARCAL1-210ENST00000445153 BMP8BP34820 402 aa17.22■□□□□ 0.35
SMARCAL1-210ENST00000445153 KIAA1755Q5JYT7 1200 aa17.22■□□□□ 0.35
SMARCAL1-210ENST00000445153 SLC9C2Q5TAH2 1124 aa17.22■□□□□ 0.35
SMARCAL1-210ENST00000445153 TRMT44Q8IYL2 757 aaKnown RBP17.22■□□□□ 0.35
SMARCAL1-210ENST00000445153 APBA2Q99767 749 aa17.22■□□□□ 0.35
SMARCAL1-210ENST00000445153 ZNF532Q9HCE3 1301 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 SPDYE16A6NNV3 312 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 SMIM22K7EJ46 135 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 POLR3DP05423 398 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 PTPREP23469 700 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 MAGEA10P43363 369 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 USP14P54578 494 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 LBX2Q6XYB7 198 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 NPLOC4Q8TAT6 608 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 SDR42E1Q8WUS8 393 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 RPAP3Q9H6T3 665 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 CABP5Q9NP86 173 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 MCM9Q9NXL9 1143 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 LAMA3Q16787 3333 aa17.21■□□□□ 0.35
SMARCAL1-210ENST00000445153 GOLIM4O00461 696 aa17.2■□□□□ 0.34
SMARCAL1-210ENST00000445153 CHGBP05060 677 aa17.2■□□□□ 0.34
SMARCAL1-210ENST00000445153 LRRC26Q2I0M4 334 aa17.2■□□□□ 0.34
SMARCAL1-210ENST00000445153 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
SMARCAL1-210ENST00000445153 SIAH1Q8IUQ4 282 aa17.2■□□□□ 0.34
SMARCAL1-210ENST00000445153 SLC44A5Q8NCS7 719 aa17.2■□□□□ 0.34
SMARCAL1-210ENST00000445153 BCL11AQ9H165 835 aa17.2■□□□□ 0.34
SMARCAL1-210ENST00000445153 DCP1AQ9NPI6 582 aaPredicted RBP17.2■□□□□ 0.34
SMARCAL1-210ENST00000445153 SLC15A5A6NIM6 579 aa17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 PRKAB2O43741 272 aa17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 IGHA2P01877 340 aa17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 TTF1Q15361 905 aaPredicted RBP17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 WDR78Q5VTH9 848 aa17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 TRPV1Q8NER1 839 aa17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 DYNLL2Q96FJ2 89 aa17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 CRNKL1Q9BZJ0 848 aaKnown RBP17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 ARMT1Q9H993 441 aa17.19■□□□□ 0.34
SMARCAL1-210ENST00000445153 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 HOXC6P09630 235 aa17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 CYP2C19P33261 490 aa17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 CCNA1P78396 465 aa17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 GRB14Q14449 540 aa17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 CLEC10AQ8IUN9 316 aa17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 CLASRPQ8N2M8 674 aaKnown RBP17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 CWC22Q9HCG8 908 aaKnown RBP17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 ZBTB40Q9NUA8 1239 aa17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 COG6Q9Y2V7 657 aa17.18■□□□□ 0.34
SMARCAL1-210ENST00000445153 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
SMARCAL1-210ENST00000445153 KIF1BPQ96EK5 621 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms