RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 KDM5AP29375 1690 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 FOXN1O15353 648 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 PDHBP11177 359 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 NR1D1P20393 614 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 PCK1P35558 622 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 GUCY2DQ02846 1103 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 STOX1Q6ZVD7 989 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 TSKSQ9UJT2 592 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 KIF28PB7ZC32 967 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 RTN1Q16799 776 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 SPDL1Q96EA4 605 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.6□□□□□ -1.514e-7■■■■□ 21.1
HERC1-201ENST00000443617 SAMD15Q9P1V8 674 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 CYP21A2P08686 494 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 PAK1Q13153 545 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 GOLGA6L10A0A0M3HER8 536 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 IFIT3O14879 490 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 NEFHP12036 1026 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 RWDD2BP57060 319 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 ZNF579Q8NAF0 562 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 FAM107AO95990 144 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 HSPD1P10809 573 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 C2orf54Q08AI8 447 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 GLE1Q53GS7 698 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 CCDC170Q8IYT3 715 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 VPS16Q9H269 839 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 DDX20Q9UHI6 824 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 MROH7-TTC4A0A0A0MT08 1334 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 MXRA7P84157 204 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 GNPTABQ3T906 1256 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 CYFIP2Q96F07 1278 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 HSD3B7Q9H2F3 369 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 ZFYP08048 801 aaPredicted RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 SETSIPP0DME0 302 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 MTIF2P46199 727 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 EPHB4P54760 987 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 ATP11AP98196 1134 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 PPP1R7Q15435 360 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.59□□□□□ -1.51
HERC1-201ENST00000443617 TRIM4Q9C037 500 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 NBPF3Q9H094 633 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 CNOT10Q9H9A5 744 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 BIRC3Q13489 604 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 IFI16Q16666 785 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 KBTBD3Q8NAB2 608 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 C3orf20Q8ND61 904 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 RWDD2AQ9UIY3 292 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 EIF4A1P60842 406 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 ADCY2Q08462 1091 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 ATP6V1G3Q96LB4 118 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 GGA2Q9UJY4 613 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 ZMYM6O95789 1325 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 KIAA0556O60303 1618 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 ADGBQ8N7X0 1667 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 MRC2Q9UBG0 1479 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 FDPSP14324 419 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 CWF19L2Q2TBE0 894 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 FOXP4Q8IVH2 680 aaPredicted RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 PHKBQ93100 1093 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 NACAP1Q9BZK3 213 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 ANGEL1Q9UNK9 670 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 SCTRP47872 440 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 CCDC63Q8NA47 563 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 FNTAP49354 379 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 COL9A3Q14050 684 aaPredicted RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 SH2D3CQ8N5H7 860 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 NFU1Q9UMS0 254 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 PHF20L1A8MW92 1017 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 TBC1D8BQ0IIM8 1120 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 ADD3Q9UEY8 706 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 DBNLQ9UJU6 430 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 CYP27A1Q02318 531 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 DDR1Q08345 913 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 RRP12Q5JTH9 1297 aaKnown RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 ZMYM1Q5SVZ6 1142 aa5.59□□□□□ -1.51
HERC1-201ENST00000443617 ZBTB12Q9Y330 459 aaPredicted RBP5.59□□□□□ -1.51
HERC1-201ENST00000443617 ERICH2A1L162 156 aa5.59□□□□□ -1.52
HERC1-201ENST00000443617 PDE2AO00408 941 aaPredicted RBP5.59□□□□□ -1.52
HERC1-201ENST00000443617 AMPD2Q01433 879 aa5.59□□□□□ -1.52
HERC1-201ENST00000443617 XAGE3Q8WTP9 111 aa5.59□□□□□ -1.52
HERC1-201ENST00000443617 ABHD10Q9NUJ1 306 aa5.59□□□□□ -1.52
HERC1-201ENST00000443617 PRPF6O94906 941 aaKnown RBP5.59□□□□□ -1.52
HERC1-201ENST00000443617 MDH1P40925 334 aaKnown RBP5.59□□□□□ -1.52
HERC1-201ENST00000443617 ZNF526Q8TF50 670 aaPredicted RBP5.59□□□□□ -1.52
HERC1-201ENST00000443617 CCDC189A1A4V9 331 aa5.59□□□□□ -1.52
HERC1-201ENST00000443617 CCT8L1PA6NM43 557 aa5.59□□□□□ -1.52
HERC1-201ENST00000443617 SLMAPQ14BN4 828 aa5.59□□□□□ -1.52
HERC1-201ENST00000443617 RILPL1Q5EBL4 403 aa5.59□□□□□ -1.52
HERC1-201ENST00000443617 PCDHA13Q9Y5I0 950 aa5.59□□□□□ -1.52
HERC1-201ENST00000443617 H7C1D1 291 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 UBE3BQ7Z3V4 1068 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 THOC1Q96FV9 657 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 SH3GL2Q99962 352 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 KDM4CQ9H3R0 1056 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 VIRMAQ69YN4 1812 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 ICA1Q05084 483 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 GIGYF2Q6Y7W6 1299 aaKnown RBP5.58□□□□□ -1.52
HERC1-201ENST00000443617 KDM7AQ6ZMT4 941 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 NUP58Q9BVL2 599 aa5.58□□□□□ -1.52
HERC1-201ENST00000443617 SMIM24O75264 130 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms