RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 ATRNL1Q5VV63 1379 aa22.86■■□□□ 1.25
APTR-204ENST00000440088 SHMT1P34896 483 aa22.86■■□□□ 1.25
APTR-204ENST00000440088 NBPF11Q86T75 865 aa22.86■■□□□ 1.25
APTR-204ENST00000440088 CCDC82Q8N4S0 544 aa22.86■■□□□ 1.25
APTR-204ENST00000440088 MAP3K14Q99558 947 aa22.86■■□□□ 1.25
APTR-204ENST00000440088 FZD9O00144 591 aa22.85■■□□□ 1.25
APTR-204ENST00000440088 KIF5BP33176 963 aa22.85■■□□□ 1.25
APTR-204ENST00000440088 EIF6P56537 245 aaKnown RBP22.85■■□□□ 1.25
APTR-204ENST00000440088 SH3BP5LQ7L8J4 393 aa22.85■■□□□ 1.25
APTR-204ENST00000440088 CMTR1Q8N1G2 835 aaKnown RBP22.85■■□□□ 1.25
APTR-204ENST00000440088 CEP95Q96GE4 821 aa22.85■■□□□ 1.25
APTR-204ENST00000440088 RNF26Q9BY78 433 aaPredicted RBP22.85■■□□□ 1.25
APTR-204ENST00000440088 ZNF70Q9UC06 446 aaPredicted RBP22.85■■□□□ 1.25
APTR-204ENST00000440088 DEXIO95424 95 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 PRELPP51888 382 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 KRT85P78386 507 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 FOXP4Q8IVH2 680 aaPredicted RBP22.84■■□□□ 1.25
APTR-204ENST00000440088 TMEM87AQ8NBN3 555 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 TMEM47Q9BQJ4 181 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 TRIM34Q9BYJ4 488 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 GDPD2Q9HCC8 539 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 DDX49Q9Y6V7 483 aaKnown RBP22.84■■□□□ 1.25
APTR-204ENST00000440088 CLRN2A0PK11 232 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 MYO1BO43795 1136 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 CSPP1Q1MSJ5 1256 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 SPDYE2Q495Y8 402 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 AIFM3Q96NN9 605 aa22.84■■□□□ 1.25
APTR-204ENST00000440088 SIPA1L1O43166 1804 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 AKR1B1P15121 316 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 NOVP48745 357 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 AKAP17AQ02040 695 aaKnown RBP22.83■■□□□ 1.25
APTR-204ENST00000440088 TRIM29Q14134 588 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 OTUD7BQ6GQQ9 843 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 FAM173BQ6P4H8 233 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 TMTC3Q6ZXV5 915 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 USP48Q86UV5 1035 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 CCDC17Q96LX7 622 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 UTRNP46939 3433 aa22.83■■□□□ 1.25
APTR-204ENST00000440088 TCP10L2B9ZVM9 353 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 PLEKHA8P1O95397 391 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 KLHL40Q2TBA0 621 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 FKBP1CQ5VVH2 108 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.82■■□□□ 1.24
APTR-204ENST00000440088 DNAJC18Q9H819 358 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 MYOZ2Q9NPC6 264 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 FIBPO43427 364 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 TOP1P11387 765 aaKnown RBP22.82■■□□□ 1.24
APTR-204ENST00000440088 FUT2Q10981 343 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 ZBED3Q96IU2 234 aaPredicted RBP22.82■■□□□ 1.24
APTR-204ENST00000440088 GJB4Q9NTQ9 266 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 MTMR4Q9NYA4 1195 aa22.82■■□□□ 1.24
APTR-204ENST00000440088 ARHGAP27Q6ZUM4 889 aa22.81■■□□□ 1.24
APTR-204ENST00000440088 METTL16Q86W50 562 aaKnown RBP22.81■■□□□ 1.24
APTR-204ENST00000440088 MYH6P13533 1939 aa22.81■■□□□ 1.24
APTR-204ENST00000440088 IGKV6D-41A0A0C4DH26 115 aa22.81■■□□□ 1.24
APTR-204ENST00000440088 WNT10BO00744 389 aa22.81■■□□□ 1.24
APTR-204ENST00000440088 GUCY1A2P33402 732 aa22.81■■□□□ 1.24
APTR-204ENST00000440088 ZNF280AP59817 542 aaPredicted RBP22.81■■□□□ 1.24
APTR-204ENST00000440088 KRT40Q6A162 431 aa22.81■■□□□ 1.24
APTR-204ENST00000440088 FAM151AQ8WW52 585 aa22.81■■□□□ 1.24
APTR-204ENST00000440088 DPF2Q92785 391 aa22.81■■□□□ 1.24
APTR-204ENST00000440088 CSRNP1Q96S65 589 aa22.81■■□□□ 1.24
APTR-204ENST00000440088 UBE2Q2LH0YL09 131 aa22.8■■□□□ 1.24
APTR-204ENST00000440088 PRPF3O43395 683 aaKnown RBP22.8■■□□□ 1.24
APTR-204ENST00000440088 GRM4Q14833 912 aa22.8■■□□□ 1.24
APTR-204ENST00000440088 ILDR2Q71H61 639 aa22.8■■□□□ 1.24
APTR-204ENST00000440088 SCAND2PQ9GZW5 306 aaPredicted RBP22.8■■□□□ 1.24
APTR-204ENST00000440088 VEZTQ9HBM0 779 aa22.8■■□□□ 1.24
APTR-204ENST00000440088 MPHOSPH10O00566 681 aaKnown RBP22.79■■□□□ 1.24
APTR-204ENST00000440088 GNAQP50148 359 aa22.79■■□□□ 1.24
APTR-204ENST00000440088 PPP4R3BQ5MIZ7 849 aa22.79■■□□□ 1.24
APTR-204ENST00000440088 SRBD1Q8N5C6 995 aaKnown RBP22.79■■□□□ 1.24
APTR-204ENST00000440088 SYT17Q9BSW7 474 aa22.79■■□□□ 1.24
APTR-204ENST00000440088 GJA3Q9Y6H8 435 aa22.79■■□□□ 1.24
APTR-204ENST00000440088 LMNB1P20700 586 aa22.79■■□□□ 1.24
APTR-204ENST00000440088 GMPSP49915 693 aaPredicted RBP22.79■■□□□ 1.24
APTR-204ENST00000440088 CERKLQ49MI3 558 aaPredicted RBP22.79■■□□□ 1.24
APTR-204ENST00000440088 TATDN1Q6P1N9 297 aa22.79■■□□□ 1.24
APTR-204ENST00000440088 BRAPQ7Z569 592 aa22.79■■□□□ 1.24
APTR-204ENST00000440088 CFAP45Q9UL16 551 aa22.79■■□□□ 1.24
APTR-204ENST00000440088 CNTNAP5Q8WYK1 1306 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 FAM196BA6NMK8 535 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 TTLL1O95922 423 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 MBD3O95983 291 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 SLURP2P0DP57 97 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 NBPF9Q3BBW0 867 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 ATL3Q6DD88 541 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 FAM83AQ86UY5 434 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 MAD2L2Q9UI95 211 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 HERC5Q9UII4 1024 aaKnown RBP22.78■■□□□ 1.24
APTR-204ENST00000440088 V9GY48 417 aaPredicted RBP22.78■■□□□ 1.24
APTR-204ENST00000440088 GREB1LQ9C091 1923 aaPredicted RBP22.78■■□□□ 1.24
APTR-204ENST00000440088 MYH15Q9Y2K3 1946 aa22.78■■□□□ 1.24
APTR-204ENST00000440088 SHTN1A0MZ66 631 aa22.77■■□□□ 1.24
APTR-204ENST00000440088 XBP1P17861 261 aa22.77■■□□□ 1.24
APTR-204ENST00000440088 KIF23Q02241 960 aaPredicted RBP22.77■■□□□ 1.24
APTR-204ENST00000440088 CNTNAP1P78357 1384 aa22.77■■□□□ 1.24
APTR-204ENST00000440088 MICALL2Q8IY33 904 aa22.77■■□□□ 1.24
APTR-204ENST00000440088 RBM27Q9P2N5 1060 aaKnown RBP22.77■■□□□ 1.24
APTR-204ENST00000440088 TFIP11Q9UBB9 837 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms