RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 DDB1Q16531 1140 aa15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 NUTM2AQ8IVF1 878 aaPredicted RBP15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 CELF1Q92879 486 aaKnown RBP15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 CEP131Q9UPN4 1083 aa15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 PARP3Q9Y6F1 533 aa15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 SEC31AO94979 1220 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 CYP2D6P10635 497 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 TBX2Q13207 712 aaPredicted RBP15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 ANKRD18AQ8IVF6 992 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 PAGE5Q96GU1 130 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 ZSCAN12O43309 604 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 XBP1P17861 261 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 NT5DC1Q5TFE4 455 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 PIK3AP1Q6ZUJ8 805 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 RNF26Q9BY78 433 aaPredicted RBP15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 MCM7P33993 719 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 CCT6AP40227 531 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 FUT2Q10981 343 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 PTGDRQ13258 359 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 CTR9Q6PD62 1173 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 IQCA1Q86XH1 822 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 PHF20Q9BVI0 1012 aa15.44■□□□□ 0.06
HERPUD1-204ENST00000439977 XIRP1Q702N8 1843 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 COL4A1P02462 1669 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 H2AFXP16104 143 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 PLCD1P51178 756 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 TROAPQ12815 778 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 PARP10Q53GL7 1025 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 CAVIN4Q5BKX8 364 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 SRBD1Q8N5C6 995 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 RGS22Q8NE09 1264 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 FAM84BQ96KN1 310 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 AK7Q96M32 723 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 CDC5LQ99459 802 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 MRPL44Q9H9J2 332 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 DACH1Q9UI36 760 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 PHLPP2Q6ZVD8 1323 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 CCP110O43303 1012 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 CASQ1P31415 396 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 RBL2Q08999 1139 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 DPYDQ12882 1025 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 NR1I3Q14994 352 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 MARCH10Q8NA82 808 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 GNL3LQ9NVN8 582 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 MINPP1Q9UNW1 487 aa15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 DDX60Q8IY21 1712 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-204ENST00000439977 NUP98P52948 1817 aa15.42■□□□□ 0.06
HERPUD1-204ENST00000439977 SLFN14P0C7P3 912 aa15.42■□□□□ 0.06
HERPUD1-204ENST00000439977 PRDX5P30044 214 aa15.42■□□□□ 0.06
HERPUD1-204ENST00000439977 TEX35Q5T0J7 233 aa15.42■□□□□ 0.06
HERPUD1-204ENST00000439977 IGSF22Q8N9C0 903 aa15.42■□□□□ 0.06
HERPUD1-204ENST00000439977 ITGB4P16144 1822 aa15.42■□□□□ 0.06
HERPUD1-204ENST00000439977 COL1A1P02452 1464 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 NUTM2BA6NNL0 878 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 DISP2A7MBM2 1401 aa15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 NUTM2EB1AL46 878 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 STX10O60499 249 aa15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 DHX8Q14562 1220 aaKnown RBP15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 TTC38Q5R3I4 469 aa15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 RASGRP4Q8TDF6 673 aa15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 SYNRGQ9UMZ2 1314 aa15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 NLRP5P59047 1200 aa15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 KANK3Q6NY19 840 aa15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 CTNND2Q9UQB3 1225 aa15.41■□□□□ 0.06
HERPUD1-204ENST00000439977 PRPF3O43395 683 aaKnown RBP15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 TADA3O75528 432 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 TFRCP02786 760 aaKnown RBP15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 MECOMQ03112 1051 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 NPY5RQ15761 445 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 RAD9BQ6WBX8 426 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 SPATA20Q8TB22 786 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 CCDC12Q8WUD4 166 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 FHOD1Q9Y613 1164 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 RTL9Q8NET4 1388 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 ERICH4A6NGS2 130 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 AKR1B15C9JRZ8 316 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 APTXQ7Z2E3 356 aaKnown RBP15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 EEF2KMTQ96G04 330 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 PLIN2Q99541 437 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 MYH3P11055 1940 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 A0A1B0GTH6 734 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 ABL1P00519 1130 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 CASP14P31944 242 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 TERF2Q15554 542 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 SPATA1Q5VX52 437 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 PPFIBP1Q86W92 1011 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 GPKOWQ92917 476 aaPredicted RBP eCLIP15.4■□□□□ 0.061e-6■■■■□ 19.7
HERPUD1-204ENST00000439977 VPS16Q9H269 839 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 ANAPC4Q9UJX5 808 aa15.4■□□□□ 0.06
HERPUD1-204ENST00000439977 NID2Q14112 1375 aa15.39■□□□□ 0.05
HERPUD1-204ENST00000439977 PNMA6AP0CW24 399 aaPredicted RBP15.39■□□□□ 0.05
HERPUD1-204ENST00000439977 CUL4BQ13620 913 aa15.39■□□□□ 0.05
HERPUD1-204ENST00000439977 IL17AQ16552 155 aa15.39■□□□□ 0.05
HERPUD1-204ENST00000439977 TMTC3Q6ZXV5 915 aa15.39■□□□□ 0.05
HERPUD1-204ENST00000439977 TRIML1Q8N9V2 468 aa15.39■□□□□ 0.05
HERPUD1-204ENST00000439977 CTCFLQ8NI51 663 aaPredicted RBP15.39■□□□□ 0.05
HERPUD1-204ENST00000439977 BRMS1Q9HCU9 246 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms