RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SLC4A10Q6U841 1118 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 SLC39A5Q6ZMH5 540 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 USP38Q8NB14 1042 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 ARRDC4Q8NCT1 418 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 EDC3Q96F86 508 aaKnown RBP13.9□□□□□ -0.18
CSTF3-203ENST00000438862 ASB2Q96Q27 587 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 TXNRD2Q9NNW7 524 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 DDX4Q9NQI0 724 aaKnown RBP13.9□□□□□ -0.18
CSTF3-203ENST00000438862 TMOD4Q9NZQ9 345 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 RBPJLQ9UBG7 517 aa13.9□□□□□ -0.18
CSTF3-203ENST00000438862 GLRX3O76003 335 aaKnown RBP13.89□□□□□ -0.19
CSTF3-203ENST00000438862 BACE1P56817 501 aa13.89□□□□□ -0.19
CSTF3-203ENST00000438862 ERVK-9P63128 1117 aa13.89□□□□□ -0.19
CSTF3-203ENST00000438862 ERVK-24P63145 666 aa13.89□□□□□ -0.19
CSTF3-203ENST00000438862 MAP2K5Q13163 448 aa13.89□□□□□ -0.19
CSTF3-203ENST00000438862 Q3C1V9 767 aa13.89□□□□□ -0.19
CSTF3-203ENST00000438862 WDR18Q9BV38 432 aa13.89□□□□□ -0.19
CSTF3-203ENST00000438862 C1QTNF1Q9BXJ1 281 aa13.89□□□□□ -0.19
CSTF3-203ENST00000438862 CWC22Q9HCG8 908 aaKnown RBP13.89□□□□□ -0.19
CSTF3-203ENST00000438862 PRDM5Q9NQX1 630 aaPredicted RBP13.89□□□□□ -0.19
CSTF3-203ENST00000438862 SYNGAP1Q96PV0 1343 aa13.89□□□□□ -0.19
CSTF3-203ENST00000438862 RLFQ13129 1914 aa13.88□□□□□ -0.19
CSTF3-203ENST00000438862 ATAD5Q96QE3 1844 aa13.88□□□□□ -0.19
CSTF3-203ENST00000438862 C19orf81C9J6K1 198 aa13.88□□□□□ -0.19
CSTF3-203ENST00000438862 MAP4K4O95819 1239 aaPredicted RBP13.88□□□□□ -0.19
CSTF3-203ENST00000438862 CNGA1P29973 690 aa13.88□□□□□ -0.19
CSTF3-203ENST00000438862 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
CSTF3-203ENST00000438862 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
CSTF3-203ENST00000438862 ADAMTS19Q8TE59 1207 aa13.88□□□□□ -0.19
CSTF3-203ENST00000438862 PORCNQ9H237 461 aa13.88□□□□□ -0.19
CSTF3-203ENST00000438862 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.87□□□□□ -0.19
CSTF3-203ENST00000438862 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.87□□□□□ -0.19
CSTF3-203ENST00000438862 EYA2O00167 538 aa13.87□□□□□ -0.19
CSTF3-203ENST00000438862 PEX10O60683 326 aa13.87□□□□□ -0.19
CSTF3-203ENST00000438862 BTDP43251 543 aa13.87□□□□□ -0.19
CSTF3-203ENST00000438862 ATP2B2Q01814 1243 aa13.87□□□□□ -0.19
CSTF3-203ENST00000438862 SNX17Q15036 470 aa13.87□□□□□ -0.19
CSTF3-203ENST00000438862 C1orf53Q5VUE5 145 aa13.87□□□□□ -0.19
CSTF3-203ENST00000438862 DZIP1Q86YF9 867 aaKnown RBP13.87□□□□□ -0.19
CSTF3-203ENST00000438862 KLHDC4Q8TBB5 520 aa13.87□□□□□ -0.19
CSTF3-203ENST00000438862 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
CSTF3-203ENST00000438862 UHRF1Q96T88 793 aaPredicted RBP13.87□□□□□ -0.19
CSTF3-203ENST00000438862 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
CSTF3-203ENST00000438862 THEGQ9P2T0 379 aa13.87□□□□□ -0.19
CSTF3-203ENST00000438862 HERC5Q9UII4 1024 aaKnown RBP13.87□□□□□ -0.19
CSTF3-203ENST00000438862 FAM196BA6NMK8 535 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 KBTBD13C9JR72 458 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 CCNA1P78396 465 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 MTMR2Q13614 643 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 AKNAD1Q5T1N1 836 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 GJC2Q5T442 439 aaPredicted RBP13.86□□□□□ -0.19
CSTF3-203ENST00000438862 SPTY2D1Q68D10 685 aaPredicted RBP13.86□□□□□ -0.19
CSTF3-203ENST00000438862 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 ZNF576Q9H609 170 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 PDLIM7Q9NR12 457 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 TACC3Q9Y6A5 838 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 NCOR1O75376 2440 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
CSTF3-203ENST00000438862 GPR75-ASB3A0A0A6YYF3 556 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 TRIM43BA6NCK2 446 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 SLC15A5A6NIM6 579 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 USP17L10C9JJH3 530 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 ASNSP08243 561 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 HOXC6P09630 235 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 DNAJB2P25686 324 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 EXOSC9Q06265 439 aaKnown RBP13.85□□□□□ -0.19
CSTF3-203ENST00000438862 TRIM60Q495X7 471 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 TRIM43Q96BQ3 446 aaPredicted RBP13.85□□□□□ -0.19
CSTF3-203ENST00000438862 PAGR1Q9BTK6 254 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 FLRT1Q9NZU1 646 aa13.85□□□□□ -0.19
CSTF3-203ENST00000438862 CCER2I3L3R5 266 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 NUDT7P0C024 238 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 PTPREP23469 700 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 RHBDL3P58872 404 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 RRP1BQ14684 758 aaKnown RBP13.84□□□□□ -0.19
CSTF3-203ENST00000438862 ATP2B3Q16720 1220 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 SH3RF1Q7Z6J0 888 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 PPM1EQ8WY54 764 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 GINM1Q9NU53 330 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 ABCF2Q9UG63 623 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 RABGAP1Q9Y3P9 1069 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 MROH7-TTC4A0A0A0MT08 1334 aa13.84□□□□□ -0.19
CSTF3-203ENST00000438862 BDP1A6H8Y1 2624 aa13.83□□□□□ -0.19
CSTF3-203ENST00000438862 TIFAQ96CG3 184 aa13.83□□□□□ -0.2
CSTF3-203ENST00000438862 CEP126Q9P2H0 1117 aa13.83□□□□□ -0.2
CSTF3-203ENST00000438862 HCN4Q9Y3Q4 1203 aa13.83□□□□□ -0.2
CSTF3-203ENST00000438862 IVNS1ABPQ9Y6Y0 642 aa13.83□□□□□ -0.2
CSTF3-203ENST00000438862 PDS5AQ29RF7 1337 aaKnown RBP13.83□□□□□ -0.2
CSTF3-203ENST00000438862 LDHCP07864 332 aa13.82□□□□□ -0.2
CSTF3-203ENST00000438862 CYBAP13498 195 aa13.82□□□□□ -0.2
CSTF3-203ENST00000438862 CYP2C19P33261 490 aa13.82□□□□□ -0.2
CSTF3-203ENST00000438862 PHKA1P46020 1223 aa13.82□□□□□ -0.2
CSTF3-203ENST00000438862 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
CSTF3-203ENST00000438862 ATG9AQ7Z3C6 839 aa13.82□□□□□ -0.2
CSTF3-203ENST00000438862 TRPV1Q8NER1 839 aa13.82□□□□□ -0.2
CSTF3-203ENST00000438862 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
CSTF3-203ENST00000438862 IGHA2P01877 340 aa13.81□□□□□ -0.2
CSTF3-203ENST00000438862 CLTBP09497 229 aa13.81□□□□□ -0.2
CSTF3-203ENST00000438862 RAG1P15918 1043 aa13.81□□□□□ -0.2
CSTF3-203ENST00000438862 ADCYAP1R1P41586 468 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms