RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 PDIA4P13667 645 aaKnown RBP14.47□□□□□ -0.09
HLA-DOB-206ENST00000438763 GJB2P29033 226 aa14.47□□□□□ -0.09
HLA-DOB-206ENST00000438763 PPP2R5BQ15173 497 aa14.47□□□□□ -0.09
HLA-DOB-206ENST00000438763 MAP1SQ66K74 1059 aaPredicted RBP14.47□□□□□ -0.09
HLA-DOB-206ENST00000438763 SMARCC2Q8TAQ2 1214 aa14.47□□□□□ -0.09
HLA-DOB-206ENST00000438763 CCDC17Q96LX7 622 aa14.47□□□□□ -0.09
HLA-DOB-206ENST00000438763 IL17RBQ9NRM6 502 aa14.47□□□□□ -0.09
HLA-DOB-206ENST00000438763 SHMT1P34896 483 aa14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 TNNI2P48788 182 aa14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 METAP2P50579 478 aaKnown RBP eCLIP14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 HMGN5P82970 282 aaKnown RBP14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 GRM1Q13255 1194 aa14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 RAB3GAP1Q15042 981 aa14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 RBM26Q5T8P6 1007 aaKnown RBP14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 ZNF654Q8IZM8 581 aa14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 CRACR2BQ8N4Y2 399 aaPredicted RBP14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 NSUN7Q8NE18 718 aaKnown RBP14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 VEZTQ9HBM0 779 aa14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 NCOA5Q9HCD5 579 aaKnown RBP14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 GPRC5DQ9NZD1 345 aa14.46□□□□□ -0.1
HLA-DOB-206ENST00000438763 NID2Q14112 1375 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 SCN4AP35499 1836 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 GOLGA8AA7E2F4 631 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 NMT2O60551 498 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 CTDNEP1O95476 244 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 CALM1P0DP23 149 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 CALM2P0DP24 149 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 CALM3P0DP25 149 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 NOVP48745 357 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 KIF4BQ2VIQ3 1234 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 TBC1D10BQ4KMP7 808 aaPredicted RBP14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 RCSD1Q6JBY9 416 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 TATDN1Q6P1N9 297 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 CPLX2Q6PUV4 134 aaKnown RBP14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 SAMD7Q7Z3H4 446 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 CATIPQ7Z7H3 387 aa14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 L3MBTL3Q96JM7 780 aaPredicted RBP14.45□□□□□ -0.1
HLA-DOB-206ENST00000438763 CCDC196A0A1B0GTZ2 297 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 CPLX1O14810 134 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 DDAH1O94760 285 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 EGFRP00533 1210 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 PDCP20941 246 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 ADD1P35611 737 aaKnown RBP14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 TNFAIP1Q13829 316 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 PAXIP1Q6ZW49 1069 aaPredicted RBP14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 MICU3Q86XE3 530 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 RAB11FIP4Q86YS3 637 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 CSRNP1Q96S65 589 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 TRIM34Q9BYJ4 488 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 DNAJC18Q9H819 358 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 FAM217BQ9NTX9 383 aaPredicted RBP14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 HERC5Q9UII4 1024 aaKnown RBP14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 KIF3AQ9Y496 699 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 PLIN4Q96Q06 1357 aa14.44□□□□□ -0.1
HLA-DOB-206ENST00000438763 IGKV6D-41A0A0C4DH26 115 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 PTPDC1A2A3K4 754 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 TBC1D12O60347 775 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 JAK2O60674 1132 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 CDKL5O76039 1030 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 AKR1B1P15121 316 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 SYT1P21579 422 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 CDC27P30260 824 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 FMR1Q06787 632 aaKnown RBP eCLIP14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 TROAPQ12815 778 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 RTN1Q16799 776 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 PPP4R3BQ5MIZ7 849 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 FANCBQ8NB91 859 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 MAP3K14Q99558 947 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 MYL10Q9BUA6 226 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 MCOLN1Q9GZU1 580 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 KAT14Q9H8E8 782 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 PGAP2Q9UHJ9 254 aa14.43□□□□□ -0.1
HLA-DOB-206ENST00000438763 BRD1O95696 1058 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 RXRAP19793 462 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 EPHX2P34913 555 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 PKP1Q13835 747 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 RASA3Q14644 834 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 NTRK3Q16288 839 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 CERKLQ49MI3 558 aaPredicted RBP14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 LARP1BQ659C4 914 aaKnown RBP14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 CYP4F22Q6NT55 531 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 FAM184AQ8NB25 1140 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 NUP133Q8WUM0 1156 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 CAPNS2Q96L46 248 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 TMEM47Q9BQJ4 181 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 BEGAINQ9BUH8 593 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 HACL1Q9UJ83 578 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 ZDHHC9Q9Y397 364 aa14.42□□□□□ -0.1
HLA-DOB-206ENST00000438763 STX6O43752 255 aa14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 TOP1P11387 765 aaKnown RBP14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 IFNAR1P17181 557 aa14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 LMOD1P29536 600 aaPredicted RBP14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 EPS15P42566 896 aa14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 MAP3K10Q02779 954 aa14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 CCDC144CPQ8IYA2 1237 aa14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 PNMA1Q8ND90 353 aa14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 TNPO1Q92973 898 aaKnown RBP14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 DDX11Q96FC9 970 aa14.41□□□□□ -0.1
HLA-DOB-206ENST00000438763 CEP95Q96GE4 821 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms