RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 USP17L15C9J2P7 530 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 USP17L13C9JLJ4 530 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 USP17L11C9JVI0 530 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 USP17L18D6R9N7 530 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 USP17L22D6RA61 530 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 USP17L17D6RBQ6 530 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 USP17L19D6RCP7 530 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 USP17L20D6RJB6 530 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 RLBP1P12271 317 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 SYN1P17600 705 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 USP17L24Q0WX57 530 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 TTC6Q86TZ1 520 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 RABGAP1Q9Y3P9 1069 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 PFASO15067 1338 aa23.3■■□□□ 1.32
MUC1-211ENST00000438413 CCND3P30281 292 aaPredicted RBP23.29■■□□□ 1.32
MUC1-211ENST00000438413 USP14P54578 494 aa23.29■■□□□ 1.32
MUC1-211ENST00000438413 CERKLQ49MI3 558 aaPredicted RBP23.29■■□□□ 1.32
MUC1-211ENST00000438413 CNMDO75829 334 aa23.28■■□□□ 1.32
MUC1-211ENST00000438413 CCNA1P78396 465 aa23.28■■□□□ 1.32
MUC1-211ENST00000438413 ABCB5Q2M3G0 1257 aa23.28■■□□□ 1.32
MUC1-211ENST00000438413 CEP85Q6P2H3 762 aa23.28■■□□□ 1.32
MUC1-211ENST00000438413 TMED8Q6PL24 325 aaPredicted RBP23.28■■□□□ 1.32
MUC1-211ENST00000438413 KIAA1683Q9H0B3 1180 aa23.28■■□□□ 1.32
MUC1-211ENST00000438413 GLRX3O76003 335 aaKnown RBP23.27■■□□□ 1.32
MUC1-211ENST00000438413 COL6A1P12109 1028 aa23.27■■□□□ 1.32
MUC1-211ENST00000438413 VCAM1P19320 739 aa23.27■■□□□ 1.32
MUC1-211ENST00000438413 MAGEA10P43363 369 aaPredicted RBP23.27■■□□□ 1.32
MUC1-211ENST00000438413 MAP2K5Q13163 448 aa23.27■■□□□ 1.32
MUC1-211ENST00000438413 LHX8Q68G74 356 aa23.27■■□□□ 1.32
MUC1-211ENST00000438413 CATSPERGQ6ZRH7 1159 aa23.27■■□□□ 1.32
MUC1-211ENST00000438413 AACSQ86V21 672 aa23.27■■□□□ 1.32
MUC1-211ENST00000438413 ERC1Q8IUD2 1116 aa23.27■■□□□ 1.32
MUC1-211ENST00000438413 CABP5Q9NP86 173 aa23.27■■□□□ 1.32
MUC1-211ENST00000438413 EXOC6BQ9Y2D4 811 aa23.27■■□□□ 1.32
MUC1-211ENST00000438413 WDR78Q5VTH9 848 aa23.26■■□□□ 1.31
MUC1-211ENST00000438413 ACER1Q8TDN7 264 aa23.26■■□□□ 1.31
MUC1-211ENST00000438413 EDC3Q96F86 508 aaKnown RBP23.26■■□□□ 1.31
MUC1-211ENST00000438413 SHMT1P34896 483 aa23.25■■□□□ 1.31
MUC1-211ENST00000438413 PLCD1P51178 756 aa23.25■■□□□ 1.31
MUC1-211ENST00000438413 HNRNPUQ00839 825 aaKnown RBP eCLIP23.25■■□□□ 1.31
MUC1-211ENST00000438413 RIOK1Q9BRS2 568 aaKnown RBP23.25■■□□□ 1.31
MUC1-211ENST00000438413 LBX2Q6XYB7 198 aa23.24■■□□□ 1.31
MUC1-211ENST00000438413 TDHQ8IZJ6 230 aa23.24■■□□□ 1.31
MUC1-211ENST00000438413 SLC17A8Q8NDX2 589 aa23.24■■□□□ 1.31
MUC1-211ENST00000438413 BTBD7Q9P203 1132 aa23.24■■□□□ 1.31
MUC1-211ENST00000438413 MAGEB6P1A0A0J9YX57 407 aa23.23■■□□□ 1.31
MUC1-211ENST00000438413 SLC15A5A6NIM6 579 aa23.23■■□□□ 1.31
MUC1-211ENST00000438413 POLR3DP05423 398 aaPredicted RBP23.23■■□□□ 1.31
MUC1-211ENST00000438413 PTPREP23469 700 aa23.23■■□□□ 1.31
MUC1-211ENST00000438413 MFSD14CQ5VZR4 134 aa23.23■■□□□ 1.31
MUC1-211ENST00000438413 GPR153Q6NV75 609 aa23.23■■□□□ 1.31
MUC1-211ENST00000438413 RPAP3Q9H6T3 665 aaPredicted RBP23.23■■□□□ 1.31
MUC1-211ENST00000438413 FLRT1Q9NZU1 646 aa23.23■■□□□ 1.31
MUC1-211ENST00000438413 IVNS1ABPQ9Y6Y0 642 aa23.23■■□□□ 1.31
MUC1-211ENST00000438413 SPDYE16A6NNV3 312 aaPredicted RBP23.22■■□□□ 1.31
MUC1-211ENST00000438413 GUCY1A2P33402 732 aa23.22■■□□□ 1.31
MUC1-211ENST00000438413 TTF1Q15361 905 aaPredicted RBP23.22■■□□□ 1.31
MUC1-211ENST00000438413 LRRC26Q2I0M4 334 aa23.22■■□□□ 1.31
MUC1-211ENST00000438413 LRIT3Q3SXY7 679 aa23.22■■□□□ 1.31
MUC1-211ENST00000438413 UBE2OQ9C0C9 1292 aaKnown RBP23.22■■□□□ 1.31
MUC1-211ENST00000438413 IL1RAPL2Q9NP60 686 aa23.22■■□□□ 1.31
MUC1-211ENST00000438413 MYH8P13535 1937 aa23.21■■□□□ 1.31
MUC1-211ENST00000438413 GABPAQ06546 454 aa23.21■■□□□ 1.31
MUC1-211ENST00000438413 GRB14Q14449 540 aa23.21■■□□□ 1.31
MUC1-211ENST00000438413 SEPT2Q15019 361 aa23.21■■□□□ 1.31
MUC1-211ENST00000438413 CRNKL1Q9BZJ0 848 aaKnown RBP23.21■■□□□ 1.31
MUC1-211ENST00000438413 HOXC6P09630 235 aa23.2■■□□□ 1.3
MUC1-211ENST00000438413 HSP90AB4PQ58FF6 505 aa23.2■■□□□ 1.3
MUC1-211ENST00000438413 SLC9C2Q5TAH2 1124 aa23.2■■□□□ 1.3
MUC1-211ENST00000438413 RHPN1Q8TCX5 695 aa23.2■■□□□ 1.3
MUC1-211ENST00000438413 MCM9Q9NXL9 1143 aa23.2■■□□□ 1.3
MUC1-211ENST00000438413 ZNF236Q9UL36 1845 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 A0A0G2JMZ2 1700 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 COL6A3P12111 3177 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 MPHOSPH10O00566 681 aaKnown RBP23.19■■□□□ 1.3
MUC1-211ENST00000438413 PDE6AP16499 860 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 CNGA1P29973 690 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 ATP2B2Q01814 1243 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 EVX2Q03828 476 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 DEFB123Q8N688 67 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 NPLOC4Q8TAT6 608 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 PANK1Q8TE04 598 aa23.19■■□□□ 1.3
MUC1-211ENST00000438413 DDX20Q9UHI6 824 aaKnown RBP23.19■■□□□ 1.3
MUC1-211ENST00000438413 ZNF532Q9HCE3 1301 aa23.18■■□□□ 1.3
MUC1-211ENST00000438413 MSCO60682 206 aa23.18■■□□□ 1.3
MUC1-211ENST00000438413 RLFQ13129 1914 aa23.18■■□□□ 1.3
MUC1-211ENST00000438413 A0A1W2PRG0 241 aa23.17■■□□□ 1.3
MUC1-211ENST00000438413 CYP2C19P33261 490 aa23.17■■□□□ 1.3
MUC1-211ENST00000438413 MDM2Q00987 491 aaPredicted RBP23.17■■□□□ 1.3
MUC1-211ENST00000438413 COG2Q14746 738 aa23.17■■□□□ 1.3
MUC1-211ENST00000438413 Q7L0L9 218 aa23.17■■□□□ 1.3
MUC1-211ENST00000438413 SDR42E1Q8WUS8 393 aa23.17■■□□□ 1.3
MUC1-211ENST00000438413 DNAJC2Q99543 621 aaKnown RBP23.17■■□□□ 1.3
MUC1-211ENST00000438413 SENP6Q9GZR1 1112 aaPredicted RBP23.17■■□□□ 1.3
MUC1-211ENST00000438413 GOLIM4O00461 696 aa23.16■■□□□ 1.3
MUC1-211ENST00000438413 CLASRPQ8N2M8 674 aaKnown RBP23.16■■□□□ 1.3
MUC1-211ENST00000438413 LCORLQ8N3X6 602 aa23.16■■□□□ 1.3
MUC1-211ENST00000438413 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.16■■□□□ 1.3
MUC1-211ENST00000438413 LPAR1Q92633 364 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms