RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 SERPINB13Q9UIV8 391 aa17.77■□□□□ 0.44
SGCE-205ENST00000437425 PPFIA3O75145 1194 aa17.77■□□□□ 0.43
SGCE-205ENST00000437425 SCNN1DP51172 638 aa17.77■□□□□ 0.43
SGCE-205ENST00000437425 BICD2Q8TD16 824 aa17.77■□□□□ 0.43
SGCE-205ENST00000437425 CCDC17Q96LX7 622 aa17.77■□□□□ 0.43
SGCE-205ENST00000437425 HDAC9Q9UKV0 1011 aa17.77■□□□□ 0.43
SGCE-205ENST00000437425 SYCE3A1L190 88 aa17.76■□□□□ 0.43
SGCE-205ENST00000437425 TOP1P11387 765 aaKnown RBP17.76■□□□□ 0.43
SGCE-205ENST00000437425 SMARCA1P28370 1054 aa17.76■□□□□ 0.43
SGCE-205ENST00000437425 EVX2Q03828 476 aa17.76■□□□□ 0.43
SGCE-205ENST00000437425 PICALMQ13492 652 aa17.76■□□□□ 0.43
SGCE-205ENST00000437425 GRM4Q14833 912 aa17.76■□□□□ 0.43
SGCE-205ENST00000437425 STK38Q15208 465 aa17.76■□□□□ 0.43
SGCE-205ENST00000437425 SF3A1Q15459 793 aaKnown RBP17.76■□□□□ 0.43
SGCE-205ENST00000437425 OTUD7BQ6GQQ9 843 aa17.76■□□□□ 0.43
SGCE-205ENST00000437425 KIAA0825Q8IV33 1275 aa17.76■□□□□ 0.43
SGCE-205ENST00000437425 ANP32BQ92688 251 aaKnown RBP17.76■□□□□ 0.43
SGCE-205ENST00000437425 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.76■□□□□ 0.43
SGCE-205ENST00000437425 PSME4Q14997 1843 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 A0A1W2PQ27 194 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 A0A1W2PQ64 194 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 A0A1W2PQD8 194 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 NMT2O60551 498 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 RILPL1Q5EBL4 403 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 ANO1Q5XXA6 986 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 ADALQ6DHV7 355 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 NOSTRINQ8IVI9 506 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 LARGE2Q8N3Y3 721 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 LINC00301Q8NCQ3 95 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 MXD3Q9BW11 206 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 SH3GLB2Q9NR46 395 aa17.75■□□□□ 0.43
SGCE-205ENST00000437425 COL2A1P02458 1487 aaPredicted RBP17.75■□□□□ 0.43
SGCE-205ENST00000437425 ZNF646O15015 1829 aaPredicted RBP17.75■□□□□ 0.43
SGCE-205ENST00000437425 ENTPD3O75355 529 aa17.74■□□□□ 0.43
SGCE-205ENST00000437425 ME1P48163 572 aa17.74■□□□□ 0.43
SGCE-205ENST00000437425 RBM5P52756 815 aaKnown RBP eCLIP17.74■□□□□ 0.43
SGCE-205ENST00000437425 SLC4A8Q2Y0W8 1093 aa17.74■□□□□ 0.43
SGCE-205ENST00000437425 DALRD3Q5D0E6 543 aaKnown RBP17.74■□□□□ 0.43
SGCE-205ENST00000437425 RSBN1LQ6PCB5 846 aaPredicted RBP17.74■□□□□ 0.43
SGCE-205ENST00000437425 GAS2L3Q86XJ1 694 aa17.74■□□□□ 0.43
SGCE-205ENST00000437425 AIFM3Q96NN9 605 aa17.74■□□□□ 0.43
SGCE-205ENST00000437425 TSPY26PQ9H489 355 aa17.74■□□□□ 0.43
SGCE-205ENST00000437425 STX8Q9UNK0 236 aa17.74■□□□□ 0.43
SGCE-205ENST00000437425 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
SGCE-205ENST00000437425 ECM29Q5VYK3 1845 aa17.74■□□□□ 0.43
SGCE-205ENST00000437425 SPTLC2O15270 562 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 CTAGE5O15320 804 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 PPP6R2O75170 966 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 VIL1P09327 827 aaKnown RBP17.73■□□□□ 0.43
SGCE-205ENST00000437425 XRCC6P12956 609 aaKnown RBP eCLIP17.73■□□□□ 0.43
SGCE-205ENST00000437425 CCDC73Q6ZRK6 1079 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 DIS3L2Q8IYB7 885 aaKnown RBP17.73■□□□□ 0.43
SGCE-205ENST00000437425 SLC44A5Q8NCS7 719 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 PGBD1Q96JS3 809 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 TMEM47Q9BQJ4 181 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 NUP62CLQ9H1M0 184 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 DDX4Q9NQI0 724 aaKnown RBP17.73■□□□□ 0.43
SGCE-205ENST00000437425 KCNQ5Q9NR82 932 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 PI4KBQ9UBF8 816 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 CEP131Q9UPN4 1083 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 CD2APQ9Y5K6 639 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 MORC2Q9Y6X9 1032 aaPredicted RBP17.73■□□□□ 0.43
SGCE-205ENST00000437425 V9GY48 417 aaPredicted RBP17.73■□□□□ 0.43
SGCE-205ENST00000437425 SCN9AQ15858 1988 aa17.73■□□□□ 0.43
SGCE-205ENST00000437425 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 PLEKHA8P1O95397 391 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 CALML3P27482 149 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 GUCY1A2P33402 732 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 SLC39A14Q15043 492 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 PKN1Q16512 942 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 PFKFB3Q16875 520 aaPredicted RBP17.72■□□□□ 0.43
SGCE-205ENST00000437425 FOXP4Q8IVH2 680 aaPredicted RBP17.72■□□□□ 0.43
SGCE-205ENST00000437425 NIM1KQ8IY84 436 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 CCDC82Q8N4S0 544 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 OGFOD1Q8N543 542 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 SRBD1Q8N5C6 995 aaKnown RBP17.72■□□□□ 0.43
SGCE-205ENST00000437425 TMOD2Q9NZR1 351 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 ZNRF3Q9ULT6 936 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 YDJCA8MPS7 323 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 ZBTB7AO95365 584 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 SCG2P13521 617 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 KRT2P35908 639 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 CEBPZQ03701 1054 aaKnown RBP17.72■□□□□ 0.43
SGCE-205ENST00000437425 MAP3K11Q16584 847 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 GALNT17Q6IS24 598 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 AGBL3Q8NEM8 1001 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 PHF20Q9BVI0 1012 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.72■□□□□ 0.43
SGCE-205ENST00000437425 GJB4Q9NTQ9 266 aa17.72■□□□□ 0.43
SGCE-205ENST00000437425 MYH6P13533 1939 aa17.71■□□□□ 0.43
SGCE-205ENST00000437425 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
SGCE-205ENST00000437425 BMP15O95972 392 aa17.71■□□□□ 0.43
SGCE-205ENST00000437425 CFAP100Q494V2 611 aa17.71■□□□□ 0.43
SGCE-205ENST00000437425 SPZ1Q9BXG8 430 aa17.71■□□□□ 0.43
SGCE-205ENST00000437425 TRIM34Q9BYJ4 488 aa17.71■□□□□ 0.43
SGCE-205ENST00000437425 CLSTN2Q9H4D0 955 aa17.71■□□□□ 0.43
SGCE-205ENST00000437425 MTMR4Q9NYA4 1195 aa17.71■□□□□ 0.43
SGCE-205ENST00000437425 DACT1Q9NYF0 836 aa17.71■□□□□ 0.43
SGCE-205ENST00000437425 IGKV6D-41A0A0C4DH26 115 aa17.7■□□□□ 0.42
SGCE-205ENST00000437425 TTLL1O95922 423 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms