RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 OS9Q13438 667 aaPredicted RBP16.62■□□□□ 0.25
LINC00028-201ENST00000435497 ZYXQ15942 572 aaKnown RBP16.62■□□□□ 0.25
LINC00028-201ENST00000435497 CATSPERGQ6ZRH7 1159 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
LINC00028-201ENST00000435497 MIGA1Q8NAN2 632 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 ACER1Q8TDN7 264 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 EAF2Q96CJ1 260 aaPredicted RBP16.62■□□□□ 0.25
LINC00028-201ENST00000435497 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
LINC00028-201ENST00000435497 APBA2Q99767 749 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 C1orf115Q9H7X2 142 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 NDUFB9Q9Y6M9 179 aa16.62■□□□□ 0.25
LINC00028-201ENST00000435497 ANTXR1Q9H6X2 564 aa16.61■□□□□ 0.25
LINC00028-201ENST00000435497 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
LINC00028-201ENST00000435497 PTPREP23469 700 aa16.6■□□□□ 0.25
LINC00028-201ENST00000435497 MDM2Q00987 491 aaPredicted RBP16.6■□□□□ 0.25
LINC00028-201ENST00000435497 ZKSCAN2Q63HK3 967 aa16.6■□□□□ 0.25
LINC00028-201ENST00000435497 MAGEB6Q8N7X4 407 aa16.6■□□□□ 0.25
LINC00028-201ENST00000435497 KIAA1683Q9H0B3 1180 aa16.6■□□□□ 0.25
LINC00028-201ENST00000435497 EHD4Q9H223 541 aa16.6■□□□□ 0.25
LINC00028-201ENST00000435497 BTBD7Q9P203 1132 aa16.6■□□□□ 0.25
LINC00028-201ENST00000435497 SERPINB13Q9UIV8 391 aa16.6■□□□□ 0.25
LINC00028-201ENST00000435497 STXBP5LQ9Y2K9 1186 aa16.6■□□□□ 0.25
LINC00028-201ENST00000435497 LAMA2P24043 3122 aaKnown RBP16.59■□□□□ 0.25
LINC00028-201ENST00000435497 FRMPD3Q5JV73 1810 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 SLC15A5A6NIM6 579 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 CCER2I3L3R5 266 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 IGHA2P01877 340 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 GUCY1A2P33402 732 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 USP5P45974 858 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 PLCD1P51178 756 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
LINC00028-201ENST00000435497 LBX2Q6XYB7 198 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 NPLOC4Q8TAT6 608 aa16.59■□□□□ 0.25
LINC00028-201ENST00000435497 HOXC6P09630 235 aa16.58■□□□□ 0.24
LINC00028-201ENST00000435497 VCAM1P19320 739 aa16.58■□□□□ 0.24
LINC00028-201ENST00000435497 SHMT1P34896 483 aa16.58■□□□□ 0.24
LINC00028-201ENST00000435497 USP14P54578 494 aa16.58■□□□□ 0.24
LINC00028-201ENST00000435497 CCNA1P78396 465 aa16.58■□□□□ 0.24
LINC00028-201ENST00000435497 ABCB5Q2M3G0 1257 aa16.58■□□□□ 0.24
LINC00028-201ENST00000435497 MFSD14CQ5VZR4 134 aa16.58■□□□□ 0.24
LINC00028-201ENST00000435497 TRPV1Q8NER1 839 aa16.58■□□□□ 0.24
LINC00028-201ENST00000435497 FEZ1Q99689 392 aa16.58■□□□□ 0.24
LINC00028-201ENST00000435497 SENP6Q9GZR1 1112 aaPredicted RBP16.58■□□□□ 0.24
LINC00028-201ENST00000435497 SPDYE16A6NNV3 312 aaPredicted RBP16.57■□□□□ 0.24
LINC00028-201ENST00000435497 GLRX3O76003 335 aaKnown RBP16.57■□□□□ 0.24
LINC00028-201ENST00000435497 RLBP1P12271 317 aa16.57■□□□□ 0.24
LINC00028-201ENST00000435497 EVX2Q03828 476 aa16.57■□□□□ 0.24
LINC00028-201ENST00000435497 GRB14Q14449 540 aa16.57■□□□□ 0.24
LINC00028-201ENST00000435497 TTC6Q86TZ1 520 aa16.57■□□□□ 0.24
LINC00028-201ENST00000435497 RIOK1Q9BRS2 568 aaKnown RBP16.57■□□□□ 0.24
LINC00028-201ENST00000435497 CWC22Q9HCG8 908 aaKnown RBP16.57■□□□□ 0.24
LINC00028-201ENST00000435497 DDX20Q9UHI6 824 aaKnown RBP16.57■□□□□ 0.24
LINC00028-201ENST00000435497 POTEB2H3BUK9 544 aa16.56■□□□□ 0.24
LINC00028-201ENST00000435497 CYP2C19P33261 490 aa16.56■□□□□ 0.24
LINC00028-201ENST00000435497 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
LINC00028-201ENST00000435497 GABPAQ06546 454 aa16.56■□□□□ 0.24
LINC00028-201ENST00000435497 WDR78Q5VTH9 848 aa16.56■□□□□ 0.24
LINC00028-201ENST00000435497 CERS3Q8IU89 383 aa16.56■□□□□ 0.24
LINC00028-201ENST00000435497 RPAP3Q9H6T3 665 aaPredicted RBP16.56■□□□□ 0.24
LINC00028-201ENST00000435497 UNC80Q8N2C7 3258 aa16.55■□□□□ 0.24
LINC00028-201ENST00000435497 A0A1W2PRG0 241 aa16.55■□□□□ 0.24
LINC00028-201ENST00000435497 MAP3K12Q12852 859 aa16.55■□□□□ 0.24
LINC00028-201ENST00000435497 SEPT2Q15019 361 aa16.55■□□□□ 0.24
LINC00028-201ENST00000435497 LPAR1Q92633 364 aa16.55■□□□□ 0.24
LINC00028-201ENST00000435497 CABP5Q9NP86 173 aa16.55■□□□□ 0.24
LINC00028-201ENST00000435497 CNGA1P29973 690 aa16.54■□□□□ 0.24
LINC00028-201ENST00000435497 ATN1P54259 1190 aaPredicted RBP16.54■□□□□ 0.24
LINC00028-201ENST00000435497 MOV10L1Q9BXT6 1211 aaKnown RBP16.54■□□□□ 0.24
LINC00028-201ENST00000435497 IVNS1ABPQ9Y6Y0 642 aa16.54■□□□□ 0.24
LINC00028-201ENST00000435497 RLFQ13129 1914 aa16.54■□□□□ 0.24
LINC00028-201ENST00000435497 MSCO60682 206 aa16.53■□□□□ 0.24
LINC00028-201ENST00000435497 CYBAP13498 195 aa16.53■□□□□ 0.24
LINC00028-201ENST00000435497 KIAA1755Q5JYT7 1200 aa16.53■□□□□ 0.24
LINC00028-201ENST00000435497 FAM109BQ6ICB4 259 aaPredicted RBP16.53■□□□□ 0.24
LINC00028-201ENST00000435497 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
LINC00028-201ENST00000435497 GUCD1Q96NT3 240 aa16.53■□□□□ 0.24
LINC00028-201ENST00000435497 SMCHD1A6NHR9 2005 aa16.52■□□□□ 0.24
LINC00028-201ENST00000435497 DNM1LO00429 736 aa16.52■□□□□ 0.24
LINC00028-201ENST00000435497 COBLO75128 1261 aa16.52■□□□□ 0.24
LINC00028-201ENST00000435497 POLR3DP05423 398 aaPredicted RBP16.52■□□□□ 0.24
LINC00028-201ENST00000435497 RTP1P59025 263 aa16.52■□□□□ 0.24
LINC00028-201ENST00000435497 COG2Q14746 738 aa16.52■□□□□ 0.24
LINC00028-201ENST00000435497 GJC2Q5T442 439 aaPredicted RBP16.52■□□□□ 0.24
LINC00028-201ENST00000435497 TMED8Q6PL24 325 aaPredicted RBP16.52■□□□□ 0.24
LINC00028-201ENST00000435497 AACSQ86V21 672 aa16.52■□□□□ 0.24
LINC00028-201ENST00000435497 ITPRIPQ8IWB1 547 aa16.52■□□□□ 0.24
LINC00028-201ENST00000435497 HOXC10Q9NYD6 342 aa16.52■□□□□ 0.24
LINC00028-201ENST00000435497 EXOC6BQ9Y2D4 811 aa16.52■□□□□ 0.24
LINC00028-201ENST00000435497 MAGEB6P1A0A0J9YX57 407 aa16.51■□□□□ 0.23
LINC00028-201ENST00000435497 ADORA2AP29274 412 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms