RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 DMAP1Q9NPF5 467 aaPredicted RBP12.2□□□□□ -0.46
CCDC171-202ENST00000432954 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 MSH6P52701 1360 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 REREQ9P2R6 1566 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 LRRD1A4D1F6 860 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 STXBP3O00186 592 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 WDR46O15213 610 aaKnown RBP12.2□□□□□ -0.46
CCDC171-202ENST00000432954 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
CCDC171-202ENST00000432954 CCNCP24863 283 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 SULT2A1Q06520 285 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 LBRQ14739 615 aaKnown RBP12.2□□□□□ -0.46
CCDC171-202ENST00000432954 CCDC122Q5T0U0 273 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 KAZNQ674X7 775 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 FAM117BQ6P1L5 589 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 C14orf80Q86SX3 495 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 NSUN7Q8NE18 718 aaKnown RBP12.2□□□□□ -0.46
CCDC171-202ENST00000432954 GDAP1Q8TB36 358 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 ACMSDQ8TDX5 336 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 ABHD8Q96I13 439 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 PPP1R13BQ96KQ4 1090 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 SLAIN2Q9P270 581 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 TRIM43BA6NCK2 446 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 TTC34A8MYJ7 566 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 SPTLC2O15270 562 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 RNF40O75150 1001 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 PARNO95453 639 aaKnown RBP12.19□□□□□ -0.46
CCDC171-202ENST00000432954 TUBB4BP68371 445 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 SLFN5Q08AF3 891 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 PPP2R5BQ15173 497 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 SEPT7Q16181 437 aaKnown RBP12.19□□□□□ -0.46
CCDC171-202ENST00000432954 SGSM1Q2NKQ1 1148 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 NEPROQ6NW34 567 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 NAT10Q9H0A0 1025 aaKnown RBP12.19□□□□□ -0.46
CCDC171-202ENST00000432954 GOLPH3LQ9H4A5 285 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 GOLGA6L10A0A0M3HER8 536 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 BUB1BO60566 1050 aaPredicted RBP12.19□□□□□ -0.46
CCDC171-202ENST00000432954 CD97P48960 835 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 KIF11P52732 1056 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 DDB1Q16531 1140 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 TBC1D9Q6ZT07 1266 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 TMCO5AQ8N6Q1 288 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 SUN5Q8TC36 379 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 GOLGA1Q92805 767 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 NAF1Q96HR8 494 aaKnown RBP12.19□□□□□ -0.46
CCDC171-202ENST00000432954 ZNF570Q96NI8 536 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 CARD11Q9BXL7 1154 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 TRIM5Q9C035 493 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 PCSK1NQ9UHG2 260 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 MRC2Q9UBG0 1479 aa12.19□□□□□ -0.46
CCDC171-202ENST00000432954 URB2Q14146 1524 aaKnown RBP12.18□□□□□ -0.46
CCDC171-202ENST00000432954 CFAP74Q9C0B2 1584 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 LINC00854A0A1B0GVQ3 168 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 IQCA1LA6NCM1 817 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 MYO1EQ12965 1108 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 PPFIA1Q13136 1202 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 USP48Q86UV5 1035 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
CCDC171-202ENST00000432954 DYDC1Q8WWB3 177 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 NDNQ99608 321 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 DCAF16Q9NXF7 216 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 SLC5A4Q9NY91 659 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 WDR62O43379 1518 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 BIRC5O15392 142 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 TUBBP07437 444 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 GUCY2FP51841 1108 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 NLRP5P59047 1200 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 UBE2HP62256 183 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 SARM1Q6SZW1 724 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 TRAPPC9Q96Q05 1148 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 SMC6Q96SB8 1091 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
CCDC171-202ENST00000432954 FGD5Q6ZNL6 1462 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 ACTN4O43707 911 aaKnown RBP12.17□□□□□ -0.46
CCDC171-202ENST00000432954 PFDN1O60925 122 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 CYP1A2P05177 515 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 SKIP12755 728 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 COX10Q12887 443 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 LRP8Q14114 963 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 SCYL1Q96KG9 808 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 NEUROD6Q96NK8 337 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 KAT14Q9H8E8 782 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 CLK4Q9HAZ1 481 aaKnown RBP12.17□□□□□ -0.46
CCDC171-202ENST00000432954 AASDHPPTQ9NRN7 309 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 PARP3Q9Y6F1 533 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 UBN2Q6ZU65 1347 aa12.17□□□□□ -0.46
CCDC171-202ENST00000432954 CCDC69A6NI79 296 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 B3GALNT1O75752 331 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 ALDH2P05091 517 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 ZNF131P52739 623 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 MXRA7P84157 204 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 RASSF7Q02833 373 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 CASP8Q14790 479 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
CCDC171-202ENST00000432954 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 ZGPATQ8N5A5 531 aaKnown RBP12.16□□□□□ -0.46
CCDC171-202ENST00000432954 MSANTD4Q8NCY6 345 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 EPSTI1Q96J88 318 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms