RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 PLSCR1O15162 318 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 IL1R1P14778 569 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 SAFBQ15424 915 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDAC9-212ENST00000432645 DOK7Q18PE1 504 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 C12orf60Q5U649 245 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 RBM43Q6ZSC3 357 aaKnown RBP9.59□□□□□ -0.87
HDAC9-212ENST00000432645 NOSTRINQ8IVI9 506 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 FMR1NBQ8N0W7 255 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-212ENST00000432645 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 CLIC6Q96NY7 704 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 MXD3Q9BW11 206 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 RTFDC1Q9BY42 306 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-212ENST00000432645 CBX8Q9HC52 389 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 ZNF219Q9P2Y4 722 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-212ENST00000432645 MKRN1Q9UHC7 482 aaKnown RBP9.59□□□□□ -0.87
HDAC9-212ENST00000432645 MYH2Q9UKX2 1941 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 MROH7-TTC4A0A0A0MT08 1334 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 UTRNP46939 3433 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 USP17L3A6NCW0 530 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 USP17L4A6NCW7 530 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 ORC4O43929 436 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 SRGNP10124 158 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 ZNF165P49910 485 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 SLC39A14Q15043 492 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 SBK1Q52WX2 424 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 SPECC1Q5M775 1068 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 C15orf52Q6ZUT6 534 aaKnown RBP9.59□□□□□ -0.87
HDAC9-212ENST00000432645 USP17L1Q7RTZ2 530 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 TSC1Q92574 1164 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 SHISA4Q96DD7 197 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 KLRG2A4D1S0 409 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-212ENST00000432645 LDHCP07864 332 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 PRR29P0C7W0 189 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 PCP11498 1178 aaKnown RBP9.58□□□□□ -0.88
HDAC9-212ENST00000432645 SEMA3FQ13275 785 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 CCDC94Q9BW85 323 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-212ENST00000432645 TTC36A6NLP5 189 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 RXRBP28702 533 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 PKN1Q16512 942 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 SP8Q8IXZ3 490 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 TEX11Q8IYF3 940 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 CTCFLQ8NI51 663 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-212ENST00000432645 MAP3K14Q99558 947 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 ZC3H12CQ9C0D7 883 aaKnown RBP9.58□□□□□ -0.88
HDAC9-212ENST00000432645 CABP5Q9NP86 173 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 IL17RBQ9NRM6 502 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 ATP6V0A2Q9Y487 856 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 PARP3Q9Y6F1 533 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 NID2Q14112 1375 aa9.58□□□□□ -0.88
HDAC9-212ENST00000432645 A0A1W2PQ27 194 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 A0A1W2PQ64 194 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 A0A1W2PQD8 194 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 FAM205CA6NFA0 338 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 VEGFAP15692 232 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-212ENST00000432645 PFKFB1P16118 471 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 TOB1P50616 345 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-212ENST00000432645 FUT2Q10981 343 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 PTPAQ15257 358 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 RCSD1Q6JBY9 416 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 C11orf57Q6ZUT1 292 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-212ENST00000432645 AMOTL1Q8IY63 956 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 SRBD1Q8N5C6 995 aaKnown RBP9.57□□□□□ -0.88
HDAC9-212ENST00000432645 SPC24Q8NBT2 197 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 RNF26Q9BY78 433 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-212ENST00000432645 STX8Q9UNK0 236 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 MYH15Q9Y2K3 1946 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 ZNF202O95125 648 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 TSPY3P0CV98 308 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 TSPY8P0CW00 308 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 RCAN1P53805 252 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 PICALMQ13492 652 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 DPP8Q6V1X1 898 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-212ENST00000432645 ZNF444Q8N0Y2 327 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-212ENST00000432645 C17orf53Q8N3J3 647 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-212ENST00000432645 G3V3G9 751 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 BIN1O00499 593 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 PPP4CP60510 307 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 DCAF8Q5TAQ9 597 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 ISM2Q6H9L7 571 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 SHC4Q6S5L8 630 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 KAT14Q9H8E8 782 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 CCDC39Q9UFE4 941 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 PCDHB6Q9Y5E3 794 aa9.57□□□□□ -0.88
HDAC9-212ENST00000432645 UQCRHLA0A096LP55 91 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 GPR75-ASB3A0A0A6YYF3 556 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 CTAGE5O15320 804 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 UQCRHP07919 91 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 CALM1P0DP23 149 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 CALM2P0DP24 149 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 CALM3P0DP25 149 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 NPR1P16066 1061 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 CMA1P23946 247 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 SCNN1DP51172 638 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 EARS2Q5JPH6 523 aaKnown RBP9.56□□□□□ -0.88
HDAC9-212ENST00000432645 TMTC3Q6ZXV5 915 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 RBM28Q9NW13 759 aaKnown RBP9.56□□□□□ -0.88
HDAC9-212ENST00000432645 NOL7Q9UMY1 257 aaKnown RBP9.56□□□□□ -0.88
HDAC9-212ENST00000432645 DDAH1O94760 285 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 GRIN1Q05586 938 aa9.56□□□□□ -0.88
HDAC9-212ENST00000432645 PPP2R5BQ15173 497 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms