RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ADGRE1Q14246 886 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 GRIK4Q16099 956 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 EEPD1Q7L9B9 569 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 SMYD4Q8IYR2 804 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 DZIP1LQ8IYY4 767 aaKnown RBP4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 SMARCC1Q92922 1105 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 SLC6A18Q96N87 628 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 KIF2CQ99661 725 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 FOXQ1Q9C009 403 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 AKTIPQ9H8T0 292 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 PCDHB10Q9UN67 800 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 CNTNAP5Q8WYK1 1306 aa4.68□□□□□ -1.66
HMGB1P27-201ENST00000431429 ESYT3A0FGR9 886 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 ANKRD62A6NC57 917 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 CCDC85CA6NKD9 419 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 C9IYK1 514 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 SHOXO15266 292 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 NOS3P29474 1203 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 ASPAP45381 313 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 UVSSAQ2YD98 709 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 MTERF2Q49AM1 385 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 ANKRD39Q53RE8 183 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 PRRT3Q5FWE3 981 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 KIAA1211LQ6NV74 962 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 CDPF1Q6NVV7 123 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 FDX2Q6P4F2 183 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 ARMCX6Q7L4S7 300 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 DYMQ7RTS9 669 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 MFSD2AQ8NA29 543 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 BAHD1Q8TBE0 780 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 SGSM3Q96HU1 749 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 DHRS1Q96LJ7 313 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 UBL7Q96S82 380 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 DPH2Q9BQC3 489 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 KLHL25Q9H0H3 589 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 SEMA6CQ9H3T2 930 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 PCOLCE2Q9UKZ9 415 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 ADAMTS8Q9UP79 889 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 LEMD3Q9Y2U8 911 aa4.67□□□□□ -1.66
HMGB1P27-201ENST00000431429 C9orf172C9J069 976 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 ALX3O95076 343 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 HSP90B1P14625 803 aaKnown RBP4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 MBTPS1Q14703 1052 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 BBS9Q3SYG4 887 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 NBPF12Q5TAG4 269 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 ALYREFQ86V81 257 aaKnown RBP4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 ARMC10Q8N2F6 343 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 BEND7Q8N7W2 519 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 C12orf50Q8NA57 414 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 APPBP2Q92624 585 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 GPATCH3Q96I76 525 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 SSBP4Q9BWG4 385 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 SPATA9Q9BWV2 254 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 BRINP2Q9C0B6 783 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 FANCLQ9NW38 375 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 CEP131Q9UPN4 1083 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 PTCH2Q9Y6C5 1203 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 KDM2BQ8NHM5 1336 aa4.66□□□□□ -1.66
HMGB1P27-201ENST00000431429 CDC45O75419 566 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 SLITRK5O94991 958 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 FAM153BP0C7A2 387 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 NCLP19338 710 aaKnown RBP4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 NRG1Q02297 640 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 SSRP1Q08945 709 aaKnown RBP4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 GNPTABQ3T906 1256 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 TMEM67Q5HYA8 995 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 ZC3H12BQ5HYM0 836 aaKnown RBP4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 AXDND1Q5T1B0 1012 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 C16orf86Q6ZW13 317 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 CDC37L1Q7L3B6 337 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 FAM214BQ7L5A3 538 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 HOMER1Q86YM7 354 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 PHACTR4Q8IZ21 702 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 SYNPOQ8N3V7 929 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 ZBTB38Q8NAP3 1195 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 WFDC12Q8WWY7 111 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 KISS1RQ969F8 398 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 FBXL18Q96ME1 805 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 HAUS7Q99871 368 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 CEP41Q9BYV8 373 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 PIDD1Q9HB75 910 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 PICK1Q9NRD5 415 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 C1GALT1Q9NS00 363 aa4.65□□□□□ -1.67
HMGB1P27-201ENST00000431429 A0A1W2PQU0 124 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 ANKRD34BA5PLL1 514 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 FAM86C2PA6NEL3 165 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 DYNC1LI2O43237 492 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 CLEC3AO75596 197 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 EPHX1P07099 455 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 TKFCQ3LXA3 575 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 SGO2Q562F6 1265 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 LRRC47Q8N1G4 583 aaKnown RBP4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 RIN3Q8TB24 985 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 GATA6Q92908 595 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 MEGF10Q96KG7 1140 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 MYRFLQ96LU7 910 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 NACC1Q96RE7 527 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms