RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 PLCB3Q01970 1234 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 UBE3CQ15386 1083 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 DCAF17Q5H9S7 520 aaPredicted RBP7.81□□□□□ -1.16
CPS1-203ENST00000430249 INTS8Q75QN2 995 aaKnown RBP7.81□□□□□ -1.16
CPS1-203ENST00000430249 ZNF354CQ86Y25 554 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 ZBTB38Q8NAP3 1195 aaPredicted RBP7.81□□□□□ -1.16
CPS1-203ENST00000430249 CCDC114Q96M63 670 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 STAP2Q9UGK3 403 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 WWC3Q9ULE0 1092 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 CDC42BPGQ6DT37 1551 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 TMEM110-MUSTN1A8MSY1 372 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 M0QZ92 97 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 PPFIA4O75335 1185 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 KRT5P13647 590 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 MAN1A1P33908 653 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 ARHGAP25P42331 645 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 ZNF365Q70YC5 407 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 CCDC125Q86Z20 511 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 NSMCE1Q8WV22 266 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 ATRIPQ8WXE1 791 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 LCMT1Q9UIC8 334 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.81□□□□□ -1.16
CPS1-203ENST00000430249 A2ML1A8K2U0 1454 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 PHLPP2Q6ZVD8 1323 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 CPSF1Q10570 1443 aaKnown RBP7.81□□□□□ -1.16
CPS1-203ENST00000430249 IGSF3O75054 1194 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 PPFIA1Q13136 1202 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 RAPGEF1Q13905 1077 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 BRD3Q15059 726 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 KRT40Q6A162 431 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 SNX29Q8TEQ0 813 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 JARID2Q92833 1246 aaPredicted RBP7.81□□□□□ -1.16
CPS1-203ENST00000430249 PSDA5PKW4 1024 aaPredicted RBP7.81□□□□□ -1.16
CPS1-203ENST00000430249 ZNF202O95125 648 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 CAPN2P17655 700 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 RBM6P78332 1123 aaKnown RBP7.81□□□□□ -1.16
CPS1-203ENST00000430249 BIRC3Q13489 604 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 TAF12Q16514 161 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 SYT10Q6XYQ8 523 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 REXO1Q8N1G1 1221 aaKnown RBP7.81□□□□□ -1.16
CPS1-203ENST00000430249 ZSCAN10Q96SZ4 725 aaPredicted RBP7.81□□□□□ -1.16
CPS1-203ENST00000430249 DBNDD2Q9BQY9 259 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 RTEL1Q9NZ71 1219 aa7.81□□□□□ -1.16
CPS1-203ENST00000430249 NIM1KQ8IY84 436 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPS1-203ENST00000430249 A0A1W2PQ27 194 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 A0A1W2PQ64 194 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 A0A1W2PQD8 194 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 E7EWF7 191 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 BRD1O95696 1058 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 PHKG2P15735 406 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 SLC1A4P43007 532 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 SEPT2Q15019 361 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 PDZD4Q76G19 769 aaPredicted RBP7.8□□□□□ -1.16
CPS1-203ENST00000430249 TRIM58Q8NG06 486 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 NELFBQ8WX92 580 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 CCT6BQ92526 530 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 HAUS1Q96CS2 278 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 TRIM11Q96F44 468 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 AK8Q96MA6 479 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 SEC62Q99442 399 aaKnown RBP7.8□□□□□ -1.16
CPS1-203ENST00000430249 BZW2Q9Y6E2 419 aaKnown RBP7.8□□□□□ -1.16
CPS1-203ENST00000430249 ZNF532Q9HCE3 1301 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 RFX7Q2KHR2 1363 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 E7EVH7 732 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 ATP11AP98196 1134 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPS1-203ENST00000430249 OSBPL3Q9H4L5 887 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 IFT122Q9HBG6 1241 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 IVNS1ABPQ9Y6Y0 642 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 V9GY48 417 aaPredicted RBP7.8□□□□□ -1.16
CPS1-203ENST00000430249 WDR17Q8IZU2 1322 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 IQGAP3Q86VI3 1631 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 GTPBP6O43824 516 aaPredicted RBP7.8□□□□□ -1.16
CPS1-203ENST00000430249 EVCP57679 992 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 SARNPP82979 210 aaKnown RBP7.8□□□□□ -1.16
CPS1-203ENST00000430249 ITIH3Q06033 890 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 CSRNP1Q96S65 589 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 JPH2Q9BR39 696 aaPredicted RBP7.8□□□□□ -1.16
CPS1-203ENST00000430249 ZSWIM6Q9HCJ5 1215 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPS1-203ENST00000430249 CLEC11AQ9Y240 323 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 LEMD3Q9Y2U8 911 aa7.8□□□□□ -1.16
CPS1-203ENST00000430249 NOP56O00567 594 aaKnown RBP7.79□□□□□ -1.16
CPS1-203ENST00000430249 IRX4P78413 519 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 SMAP1Q8IYB5 467 aaPredicted RBP7.79□□□□□ -1.16
CPS1-203ENST00000430249 CACNA2D3Q8IZS8 1091 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 RSRC1Q96IZ7 334 aaKnown RBP7.79□□□□□ -1.16
CPS1-203ENST00000430249 CCDC17Q96LX7 622 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 GPCPD1Q9NPB8 672 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 NPHP4O75161 1426 aaPredicted RBP7.79□□□□□ -1.16
CPS1-203ENST00000430249 H7C1D1 291 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 PPP6R2O75170 966 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 CMA1P23946 247 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 AOC3Q16853 763 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 MAP3K21Q5TCX8 1036 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 UBLCP1Q8WVY7 318 aaPredicted RBP7.79□□□□□ -1.16
CPS1-203ENST00000430249 KIFC2Q96AC6 838 aa7.79□□□□□ -1.16
CPS1-203ENST00000430249 GPHNQ9NQX3 736 aaPredicted RBP7.79□□□□□ -1.16
CPS1-203ENST00000430249 MBD5Q9P267 1494 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms