RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
CALD1-207ENST00000430085 SAFBQ15424 915 aaKnown RBP eCLIP16.57■□□□□ 0.24
CALD1-207ENST00000430085 ANKS1AQ92625 1134 aa16.57■□□□□ 0.24
CALD1-207ENST00000430085 RCOR1Q9UKL0 485 aa16.57■□□□□ 0.24
CALD1-207ENST00000430085 KIF28PB7ZC32 967 aa16.56■□□□□ 0.24
CALD1-207ENST00000430085 UBE2Q2LH0YL09 131 aa16.56■□□□□ 0.24
CALD1-207ENST00000430085 LETM1O95202 739 aaPredicted RBP16.56■□□□□ 0.24
CALD1-207ENST00000430085 XBP1P17861 261 aa16.56■□□□□ 0.24
CALD1-207ENST00000430085 SOGA3Q5TF21 947 aa16.56■□□□□ 0.24
CALD1-207ENST00000430085 MYSM1Q5VVJ2 828 aa16.56■□□□□ 0.24
CALD1-207ENST00000430085 LRSAM1Q6UWE0 723 aa16.56■□□□□ 0.24
CALD1-207ENST00000430085 TMTC3Q6ZXV5 915 aa16.56■□□□□ 0.24
CALD1-207ENST00000430085 PNMA1Q8ND90 353 aa16.56■□□□□ 0.24
CALD1-207ENST00000430085 BICD2Q8TD16 824 aa16.56■□□□□ 0.24
CALD1-207ENST00000430085 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.242e-6■■□□□ 12.1
CALD1-207ENST00000430085 DDX4Q9NQI0 724 aaKnown RBP16.56■□□□□ 0.24
CALD1-207ENST00000430085 PLEKHA8P1O95397 391 aa16.55■□□□□ 0.24
CALD1-207ENST00000430085 OSBPL5Q9H0X9 879 aaPredicted RBP16.55■□□□□ 0.24
CALD1-207ENST00000430085 RTEL1Q9NZ71 1219 aa16.55■□□□□ 0.24
CALD1-207ENST00000430085 SERPINA10Q9UK55 444 aa16.55■□□□□ 0.24
CALD1-207ENST00000430085 STX8Q9UNK0 236 aa16.55■□□□□ 0.24
CALD1-207ENST00000430085 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
CALD1-207ENST00000430085 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
CALD1-207ENST00000430085 LARGE2Q8N3Y3 721 aa16.55■□□□□ 0.24
CALD1-207ENST00000430085 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
CALD1-207ENST00000430085 ZNF646O15015 1829 aaPredicted RBP16.54■□□□□ 0.24
CALD1-207ENST00000430085 YDJCA8MPS7 323 aa16.54■□□□□ 0.24
CALD1-207ENST00000430085 MMP1P03956 469 aa16.54■□□□□ 0.24
CALD1-207ENST00000430085 XRCC6P12956 609 aaKnown RBP eCLIP16.54■□□□□ 0.24
CALD1-207ENST00000430085 ARHGAP27Q6ZUM4 889 aa16.54■□□□□ 0.24
CALD1-207ENST00000430085 PGBD1Q96JS3 809 aa16.54■□□□□ 0.24
CALD1-207ENST00000430085 MAP3K14Q99558 947 aa16.54■□□□□ 0.24
CALD1-207ENST00000430085 POLR3EQ9NVU0 708 aa16.54■□□□□ 0.24
CALD1-207ENST00000430085 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
CALD1-207ENST00000430085 U2AF2P26368 475 aaKnown RBP eCLIP16.53■□□□□ 0.248e-8■□□□□ 10.4
CALD1-207ENST00000430085 ME1P48163 572 aa16.53■□□□□ 0.24
CALD1-207ENST00000430085 FUT2Q10981 343 aa16.53■□□□□ 0.24
CALD1-207ENST00000430085 STK38Q15208 465 aa16.53■□□□□ 0.24
CALD1-207ENST00000430085 SF3A1Q15459 793 aaKnown RBP16.53■□□□□ 0.24
CALD1-207ENST00000430085 ZNF277Q9NRM2 450 aaPredicted RBP16.53■□□□□ 0.24
CALD1-207ENST00000430085 SWAP70Q9UH65 585 aa16.53■□□□□ 0.24
CALD1-207ENST00000430085 V9GY48 417 aaPredicted RBP16.53■□□□□ 0.24
CALD1-207ENST00000430085 MYH6P13533 1939 aa16.53■□□□□ 0.24
CALD1-207ENST00000430085 MYO3BQ8WXR4 1341 aa16.53■□□□□ 0.24
CALD1-207ENST00000430085 YEATS4O95619 227 aa16.53■□□□□ 0.24
CALD1-207ENST00000430085 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.53■□□□□ 0.24
CALD1-207ENST00000430085 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
CALD1-207ENST00000430085 KCNJ14Q9UNX9 436 aa16.53■□□□□ 0.24
CALD1-207ENST00000430085 CNTNAP5Q8WYK1 1306 aa16.52■□□□□ 0.24
CALD1-207ENST00000430085 NFKBIEO00221 500 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 LIG1P18858 919 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 GNAQP50148 359 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 RASSF7Q02833 373 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 GABPAQ06546 454 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 NFIAQ12857 509 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 DIS3L2Q8IYB7 885 aaKnown RBP16.52■□□□□ 0.23
CALD1-207ENST00000430085 SRBD1Q8N5C6 995 aaKnown RBP16.52■□□□□ 0.23
CALD1-207ENST00000430085 KCNG4Q8TDN1 519 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 TMEM47Q9BQJ4 181 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 CLIC4Q9Y696 253 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 SBF1O95248 1867 aa16.52■□□□□ 0.23
CALD1-207ENST00000430085 NASPP49321 788 aaPredicted RBP16.51■□□□□ 0.23
CALD1-207ENST00000430085 GRM4Q14833 912 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 PKN1Q16512 942 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 ANO1Q5XXA6 986 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 LINC00301Q8NCQ3 95 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 FOXP1Q9H334 677 aaPredicted RBP16.51■□□□□ 0.23
CALD1-207ENST00000430085 TSPY26PQ9H489 355 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 PCDHAC2Q9Y5I4 1007 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 GRIN3BO60391 1043 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 CEP95Q96GE4 821 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 IDI2Q9BXS1 227 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 NUP62CLQ9H1M0 184 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 TAOK3Q9H2K8 898 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 DHX36Q9H2U1 1008 aaKnown RBP16.51■□□□□ 0.23
CALD1-207ENST00000430085 DDX19AQ9NUU7 478 aaKnown RBP16.51■□□□□ 0.23
CALD1-207ENST00000430085 DACT1Q9NYF0 836 aa16.51■□□□□ 0.23
CALD1-207ENST00000430085 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 BTBD18B2RXH4 712 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 SPTLC2O15270 562 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 RAD17O75943 681 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 CACNB3P54284 484 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 TCP10Q12799 353 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 CFAP100Q494V2 611 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 RSBN1LQ6PCB5 846 aaPredicted RBP16.5■□□□□ 0.23
CALD1-207ENST00000430085 NIM1KQ8IY84 436 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 VPS54Q9P1Q0 977 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 MTMR7Q9Y216 660 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 PLIN4Q96Q06 1357 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 PSME4Q14997 1843 aa16.5■□□□□ 0.23
CALD1-207ENST00000430085 TOP1P11387 765 aaKnown RBP16.49■□□□□ 0.23
CALD1-207ENST00000430085 CCDC73Q6ZRK6 1079 aa16.49■□□□□ 0.23
CALD1-207ENST00000430085 ZSCAN29Q8IWY8 852 aaPredicted RBP16.49■□□□□ 0.23
CALD1-207ENST00000430085 CCAR1Q8IX12 1150 aaKnown RBP16.49■□□□□ 0.23
CALD1-207ENST00000430085 EHD4Q9H223 541 aa16.49■□□□□ 0.23
CALD1-207ENST00000430085 BRMS1Q9HCU9 246 aa16.49■□□□□ 0.23
CALD1-207ENST00000430085 HDAC9Q9UKV0 1011 aa16.49■□□□□ 0.23
CALD1-207ENST00000430085 MYH8P13535 1937 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms