RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 USP49Q70CQ1 688 aa17.11■□□□□ 0.33
LINC00839-202ENST00000429940 PANX2Q96RD6 677 aa17.11■□□□□ 0.33
LINC00839-202ENST00000429940 ERICH2A1L162 156 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 GSG1L2A8MUP6 293 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 OAS2P29728 719 aaKnown RBP17.1■□□□□ 0.33
LINC00839-202ENST00000429940 ATP6V1AP38606 617 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 CRACR2BQ8N4Y2 399 aaPredicted RBP17.1■□□□□ 0.33
LINC00839-202ENST00000429940 HELBQ8NG08 1087 aaPredicted RBP17.1■□□□□ 0.33
LINC00839-202ENST00000429940 SPATA20Q8TB22 786 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 OXER1Q8TDS5 423 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 LPIN2Q92539 896 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 CCDC34Q96HJ3 373 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 CCDC196A0A1B0GTZ2 297 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 STARD3NLO95772 234 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 CYP19A1P11511 503 aaPredicted RBP17.1■□□□□ 0.33
LINC00839-202ENST00000429940 TDO2P48775 406 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 SIK1P57059 783 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 ITPK1Q13572 414 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 SMC1AQ14683 1233 aaKnown RBP17.1■□□□□ 0.33
LINC00839-202ENST00000429940 ZNF772Q68DY9 489 aaPredicted RBP17.1■□□□□ 0.33
LINC00839-202ENST00000429940 STAG1Q8WVM7 1258 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 CABP5Q9NP86 173 aa17.1■□□□□ 0.33
LINC00839-202ENST00000429940 TRMT112Q9UI30 125 aaKnown RBP17.1■□□□□ 0.33
LINC00839-202ENST00000429940 TEX33O43247 280 aa17.09■□□□□ 0.33
LINC00839-202ENST00000429940 TXLNAP40222 546 aa17.09■□□□□ 0.33
LINC00839-202ENST00000429940 PPFIBP1Q86W92 1011 aa17.09■□□□□ 0.33
LINC00839-202ENST00000429940 IRX2Q9BZI1 471 aaPredicted RBP17.09■□□□□ 0.33
LINC00839-202ENST00000429940 LZTFL1Q9NQ48 299 aa17.09■□□□□ 0.33
LINC00839-202ENST00000429940 PRKAB2O43741 272 aa17.09■□□□□ 0.33
LINC00839-202ENST00000429940 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
LINC00839-202ENST00000429940 SMIM5Q71RC9 77 aa17.09■□□□□ 0.33
LINC00839-202ENST00000429940 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
LINC00839-202ENST00000429940 SYNRGQ9UMZ2 1314 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 ARAP2Q8WZ64 1704 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 DOCK2Q92608 1830 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 PDE8AO60658 829 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 RBL2Q08999 1139 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 RASGRF1Q13972 1273 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 SPATA1Q5VX52 437 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 JAKMIP3Q5VZ66 844 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 KLHL10Q6JEL2 608 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 APTXQ7Z2E3 356 aaKnown RBP17.08■□□□□ 0.33
LINC00839-202ENST00000429940 IGSF22Q8N9C0 903 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 FANCBQ8NB91 859 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 NAA15Q9BXJ9 866 aaKnown RBP17.08■□□□□ 0.33
LINC00839-202ENST00000429940 NACAP1Q9BZK3 213 aa17.08■□□□□ 0.33
LINC00839-202ENST00000429940 ZCCHC17Q9NP64 241 aaKnown RBP17.08■□□□□ 0.33
LINC00839-202ENST00000429940 MROH5Q6ZUA9 1318 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 FGFR2P21802 821 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 AFMP43652 599 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 HNRNPH2P55795 449 aaKnown RBP17.08■□□□□ 0.32
LINC00839-202ENST00000429940 RAD9BQ6WBX8 426 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 CPLX3Q8WVH0 158 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 FUT8Q9BYC5 575 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 ADGRG1Q9Y653 693 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 SLC4A4Q9Y6R1 1079 aa17.08■□□□□ 0.32
LINC00839-202ENST00000429940 ANKRD36CQ5JPF3 1778 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 SLC5A1P13866 664 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 STX17P56962 302 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
LINC00839-202ENST00000429940 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 LCORLQ8N3X6 602 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 ZSWIM4Q9H7M6 989 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 AATFQ9NY61 560 aaKnown RBP eCLIP17.07■□□□□ 0.32
LINC00839-202ENST00000429940 KIF5CO60282 957 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 CD44P16070 742 aaKnown RBP17.07■□□□□ 0.32
LINC00839-202ENST00000429940 GNAT2P19087 354 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 CHMP4BP1P59074 171 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 ST5P78524 1137 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 SRGAP1Q7Z6B7 1085 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 TXLNBQ8N3L3 684 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 NEK11Q8NG66 645 aa17.07■□□□□ 0.32
LINC00839-202ENST00000429940 A0A087X0B3 334 aa17.06■□□□□ 0.32
LINC00839-202ENST00000429940 CCDC151A5D8V7 595 aa17.06■□□□□ 0.32
LINC00839-202ENST00000429940 TRIM75PA6NK02 468 aa17.06■□□□□ 0.32
LINC00839-202ENST00000429940 CUL4BQ13620 913 aa17.06■□□□□ 0.32
LINC00839-202ENST00000429940 LONRF2Q1L5Z9 754 aa17.06■□□□□ 0.32
LINC00839-202ENST00000429940 EPSTI1Q96J88 318 aa17.06■□□□□ 0.32
LINC00839-202ENST00000429940 ADD3Q9UEY8 706 aaKnown RBP17.06■□□□□ 0.32
LINC00839-202ENST00000429940 SBF2Q86WG5 1849 aa17.06■□□□□ 0.32
LINC00839-202ENST00000429940 BTAF1O14981 1849 aa17.06■□□□□ 0.32
LINC00839-202ENST00000429940 TRIM37O94972 964 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 RXRBP28702 533 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 PBX1P40424 430 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 RCAN1P53805 252 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 BRD3Q15059 726 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 CDKAL1Q5VV42 579 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 PAGE5Q96GU1 130 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 CTAGE1Q96RT6 745 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 MTA3Q9BTC8 594 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 LRP5O75197 1615 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 A0A0U1RQJ8 604 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 FAM205CA6NFA0 338 aa17.05■□□□□ 0.32
LINC00839-202ENST00000429940 MFAP3LO75121 409 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms