RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ADAMTS3O15072 1205 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 CUL4BQ13620 913 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 GPR161Q8N6U8 529 aaKnown RBP14.15□□□□□ -0.14
CDH3-202ENST00000429102 WASF1Q92558 559 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 GPKOWQ92917 476 aaPredicted RBP eCLIP14.15□□□□□ -0.14
CDH3-202ENST00000429102 PAGE5Q96GU1 130 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 CPVLQ9H3G5 476 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 TMEM51Q9NW97 253 aa14.15□□□□□ -0.14
CDH3-202ENST00000429102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDH3-202ENST00000429102 CPDO75976 1380 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 SOS2Q07890 1332 aaPredicted RBP14.14□□□□□ -0.15
CDH3-202ENST00000429102 GIGYF2Q6Y7W6 1299 aaKnown RBP14.14□□□□□ -0.15
CDH3-202ENST00000429102 ADGRA1Q86SQ6 560 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 NOA1Q8NC60 698 aaKnown RBP14.14□□□□□ -0.15
CDH3-202ENST00000429102 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 RSPH14Q9UHP6 348 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 ADGRG1Q9Y653 693 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 TMEM94Q12767 1356 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 CTAGE9A4FU28 777 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 DEXIO95424 95 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 IFNAR1P17181 557 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 RAD51AP2Q09MP3 1159 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 PUM3Q15397 648 aaKnown RBP14.14□□□□□ -0.15
CDH3-202ENST00000429102 FOXR1Q6PIV2 292 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 SRRTQ9BXP5 876 aaKnown RBP14.14□□□□□ -0.15
CDH3-202ENST00000429102 KIF13AQ9H1H9 1805 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 ZPR1O75312 459 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 MDM2Q00987 491 aaPredicted RBP14.14□□□□□ -0.15
CDH3-202ENST00000429102 PPARAQ07869 468 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 UBE3CQ15386 1083 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 HSP90B2PQ58FF3 399 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 ENOX1Q8TC92 643 aaKnown RBP14.14□□□□□ -0.15
CDH3-202ENST00000429102 KRT23Q9C075 422 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 RFX7Q2KHR2 1363 aa14.14□□□□□ -0.15
CDH3-202ENST00000429102 MACROD2A1Z1Q3 448 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 IBSPP21815 317 aaPredicted RBP14.13□□□□□ -0.15
CDH3-202ENST00000429102 PLCD1P51178 756 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 VSNL1P62760 191 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 MORC3Q14149 939 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 XBP1P17861 261 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 TXLNAP40222 546 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 TTC19Q6DKK2 380 aaPredicted RBP14.13□□□□□ -0.15
CDH3-202ENST00000429102 LPIN2Q92539 896 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 VAT1LQ9HCJ6 419 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 TFCP2L1Q9NZI6 479 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 ARHGAP23Q9P227 1491 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 MED1Q15648 1581 aaPredicted RBP14.13□□□□□ -0.15
CDH3-202ENST00000429102 ACTN4O43707 911 aaKnown RBP14.13□□□□□ -0.15
CDH3-202ENST00000429102 NR1I3Q14994 352 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 FUT8Q9BYC5 575 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 ATG3Q9NT62 314 aa14.13□□□□□ -0.15
CDH3-202ENST00000429102 KRT2P35908 639 aa14.12□□□□□ -0.15
CDH3-202ENST00000429102 CYP27A1Q02318 531 aa14.12□□□□□ -0.15
CDH3-202ENST00000429102 KIFC2Q96AC6 838 aa14.12□□□□□ -0.15
CDH3-202ENST00000429102 KDM3BQ7LBC6 1761 aa14.12□□□□□ -0.15
CDH3-202ENST00000429102 USP17L12C9JPN9 530 aa14.12□□□□□ -0.15
CDH3-202ENST00000429102 USP17L21D6R901 530 aa14.12□□□□□ -0.15
CDH3-202ENST00000429102 SUSD4Q5VX71 490 aa14.12□□□□□ -0.15
CDH3-202ENST00000429102 CATIPQ7Z7H3 387 aa14.12□□□□□ -0.15
CDH3-202ENST00000429102 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.12□□□□□ -0.15
CDH3-202ENST00000429102 AATFQ9NY61 560 aaKnown RBP eCLIP14.12□□□□□ -0.15
CDH3-202ENST00000429102 MAP3K15Q6ZN16 1313 aa14.12□□□□□ -0.15
CDH3-202ENST00000429102 CTAGE15A4D2H0 777 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 CTAGE8P0CG41 777 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 CYP2D6P10635 497 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 EIF5P55010 431 aaKnown RBP14.11□□□□□ -0.15
CDH3-202ENST00000429102 KRT31Q15323 416 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 CTAGE6Q86UF2 777 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 CTAGE4Q8IX94 777 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 SHISA4Q96DD7 197 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 AK7Q96M32 723 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 CEP131Q9UPN4 1083 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 SRPRBQ9Y5M8 271 aaKnown RBP14.11□□□□□ -0.15
CDH3-202ENST00000429102 CCDC196A0A1B0GTZ2 297 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 ERVV-2B6SEH9 535 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 GYPCP04921 128 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 UQCRFS1P1P0C7P4 283 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 IGHMBP2P38935 993 aaKnown RBP14.11□□□□□ -0.15
CDH3-202ENST00000429102 TSR1Q2NL82 804 aaKnown RBP14.11□□□□□ -0.15
CDH3-202ENST00000429102 TTC38Q5R3I4 469 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 SPATA1Q5VX52 437 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 SRGAP1Q7Z6B7 1085 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 KIAA1328Q86T90 577 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 NELFBQ8WX92 580 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 HPS3Q969F9 1004 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 BTG4Q9NY30 223 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 MAGEB6P1A0A0J9YX57 407 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 PDE8AO60658 829 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 CSF1RP07333 972 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 TAF3Q5VWG9 929 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 LEKR1Q6ZMV7 388 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 ANKRD13CQ8N6S4 541 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 ESR2Q92731 530 aa14.11□□□□□ -0.15
CDH3-202ENST00000429102 NIP7Q9Y221 180 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDH3-202ENST00000429102 ZNF18P17022 549 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 NAP1L1P55209 391 aaKnown RBP14.1□□□□□ -0.15
CDH3-202ENST00000429102 JADE2Q9NQC1 790 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 C1orf167Q5SNV9 1468 aa14.1□□□□□ -0.15
CDH3-202ENST00000429102 KLK7P49862 253 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms