RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 SPP2Q13103 211 aa13.77□□□□□ -0.21
PABPC1P11-201ENST00000428966 ABCB5Q2M3G0 1257 aa13.77□□□□□ -0.21
PABPC1P11-201ENST00000428966 ZNF280CQ8ND82 737 aa13.77□□□□□ -0.21
PABPC1P11-201ENST00000428966 SWAP70Q9UH65 585 aa13.77□□□□□ -0.21
PABPC1P11-201ENST00000428966 ISY1Q9ULR0 285 aaKnown RBP13.77□□□□□ -0.21
PABPC1P11-201ENST00000428966 LAMB1P07942 1786 aa13.77□□□□□ -0.21
PABPC1P11-201ENST00000428966 ROBO3Q96MS0 1386 aa13.77□□□□□ -0.21
PABPC1P11-201ENST00000428966 A0A0G2JLL6 359 aaPredicted RBP13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 HIP1O00291 1037 aa13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 GUCY1A2P33402 732 aa13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 DGKZQ13574 1117 aa13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 PRRT2Q7Z6L0 340 aaPredicted RBP13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 TRAK2O60296 914 aa13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 FGAP02671 866 aa13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 CHMLP26374 656 aa13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 DDIT3P35638 169 aa13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 RAB3GAP1Q15042 981 aa13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 GINM1Q9NU53 330 aa13.76□□□□□ -0.21
PABPC1P11-201ENST00000428966 CENPFP49454 3210 aa13.75□□□□□ -0.21
PABPC1P11-201ENST00000428966 ALDH1A1P00352 501 aa13.75□□□□□ -0.21
PABPC1P11-201ENST00000428966 AKR1B1P15121 316 aa13.75□□□□□ -0.21
PABPC1P11-201ENST00000428966 MTMR2Q13614 643 aa13.75□□□□□ -0.21
PABPC1P11-201ENST00000428966 SEPT2Q15019 361 aa13.75□□□□□ -0.21
PABPC1P11-201ENST00000428966 WDR18Q9BV38 432 aa13.75□□□□□ -0.21
PABPC1P11-201ENST00000428966 CFHR5Q9BXR6 569 aa13.75□□□□□ -0.21
PABPC1P11-201ENST00000428966 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
PABPC1P11-201ENST00000428966 HTTP42858 3142 aa13.75□□□□□ -0.21
PABPC1P11-201ENST00000428966 FSD2A1L4K1 749 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 MPHOSPH10O00566 681 aaKnown RBP13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 PRDM1O75626 825 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 HMGCS2P54868 508 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 PPARAQ07869 468 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 CRHR2Q13324 411 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 ALX1Q15699 326 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 GPAT2Q6NUI2 795 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 CLEC10AQ8IUN9 316 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 GBP4Q96PP9 640 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 CDC45O75419 566 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 RASA1P20936 1047 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 BACE1P56817 501 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 OTUD7BQ6GQQ9 843 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 AS3MTQ9HBK9 375 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 CABP5Q9NP86 173 aa13.74□□□□□ -0.21
PABPC1P11-201ENST00000428966 CTDSPL2Q05D32 466 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 TREML2Q5T2D2 321 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 TMEM179Q6ZVK1 233 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 ANKRD23Q86SG2 305 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 ACER1Q8TDN7 264 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 TACC3Q9Y6A5 838 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 ATAD5Q96QE3 1844 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 USP17L10C9JJH3 530 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 PDHXO00330 501 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 TAF1CQ15572 869 aaPredicted RBP13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 SKOR2Q2VWA4 1001 aaPredicted RBP13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 SH3D19Q5HYK7 790 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 FASTKD5Q7L8L6 764 aaKnown RBP13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 SIAH1Q8IUQ4 282 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 CCDC17Q96LX7 622 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 MKNK2Q9HBH9 465 aa13.73□□□□□ -0.21
PABPC1P11-201ENST00000428966 ZMYM6O95789 1325 aa13.72□□□□□ -0.21
PABPC1P11-201ENST00000428966 A0A1W2PRG0 241 aa13.72□□□□□ -0.21
PABPC1P11-201ENST00000428966 MRE11P49959 708 aa13.72□□□□□ -0.21
PABPC1P11-201ENST00000428966 COL13A1Q5TAT6 717 aaPredicted RBP13.72□□□□□ -0.21
PABPC1P11-201ENST00000428966 ANAPC4Q9UJX5 808 aa13.72□□□□□ -0.21
PABPC1P11-201ENST00000428966 HSP90AA1P07900 732 aaKnown RBP13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 CYP2C8P10632 490 aa13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 HAND2P61296 217 aa13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 ZYXQ15942 572 aaKnown RBP13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 PROCA1Q8NCQ7 364 aaPredicted RBP13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 NBPF3Q9H094 633 aa13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 ZCCHC17Q9NP64 241 aaKnown RBP13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 PRDM10Q9NQV6 1147 aa13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 EMILIN3Q9NT22 766 aa13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 AGTPBP1Q9UPW5 1226 aa13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 RAD50Q92878 1312 aa13.71□□□□□ -0.21
PABPC1P11-201ENST00000428966 K7ELQ4 463 aaPredicted RBP13.71□□□□□ -0.22
PABPC1P11-201ENST00000428966 GPR25O00155 361 aa13.71□□□□□ -0.22
PABPC1P11-201ENST00000428966 SGSM2O43147 1006 aa13.71□□□□□ -0.22
PABPC1P11-201ENST00000428966 ZNF296Q8WUU4 475 aaPredicted RBP13.71□□□□□ -0.22
PABPC1P11-201ENST00000428966 DSCC1Q9BVC3 393 aa13.71□□□□□ -0.22
PABPC1P11-201ENST00000428966 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.71□□□□□ -0.22
PABPC1P11-201ENST00000428966 C19orf81C9J6K1 198 aa13.7□□□□□ -0.22
PABPC1P11-201ENST00000428966 ICA1Q05084 483 aa13.7□□□□□ -0.22
PABPC1P11-201ENST00000428966 PDE4BQ07343 736 aa13.7□□□□□ -0.22
PABPC1P11-201ENST00000428966 RUFY2Q8WXA3 655 aa13.7□□□□□ -0.22
PABPC1P11-201ENST00000428966 KIF2CQ99661 725 aa13.7□□□□□ -0.22
PABPC1P11-201ENST00000428966 KIAA1683Q9H0B3 1180 aa13.7□□□□□ -0.22
PABPC1P11-201ENST00000428966 PTPRFP10586 1907 aa13.7□□□□□ -0.22
PABPC1P11-201ENST00000428966 TLR2O60603 784 aa13.69□□□□□ -0.22
PABPC1P11-201ENST00000428966 SLC3A2P08195 630 aaKnown RBP13.69□□□□□ -0.22
PABPC1P11-201ENST00000428966 FGRP09769 529 aa13.69□□□□□ -0.22
PABPC1P11-201ENST00000428966 XRCC6P12956 609 aaKnown RBP eCLIP13.69□□□□□ -0.22
PABPC1P11-201ENST00000428966 PTH1RQ03431 593 aa13.69□□□□□ -0.22
PABPC1P11-201ENST00000428966 NOM1Q5C9Z4 860 aaKnown RBP13.69□□□□□ -0.22
PABPC1P11-201ENST00000428966 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
PABPC1P11-201ENST00000428966 TBC1D10CQ8IV04 446 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms