RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 GUCY1A2P33402 732 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 METAP2P50579 478 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMC6-204ENST00000428868 FOSBP53539 338 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 RASA3Q14644 834 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 SART3Q15020 963 aaKnown RBP10.4□□□□□ -0.74
SMC6-204ENST00000428868 NTRK3Q16288 839 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 FOXD4L5Q5VV16 416 aaPredicted RBP10.4□□□□□ -0.74
SMC6-204ENST00000428868 FKBP1CQ5VVH2 108 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 PRAMEF18Q5VWM3 479 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 FAM83AQ86UY5 434 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 IQCA1Q86XH1 822 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 CMTR1Q8N1G2 835 aaKnown RBP10.4□□□□□ -0.74
SMC6-204ENST00000428868 CRACR2BQ8N4Y2 399 aaPredicted RBP10.4□□□□□ -0.74
SMC6-204ENST00000428868 ZNF526Q8TF50 670 aaPredicted RBP10.4□□□□□ -0.74
SMC6-204ENST00000428868 NUP133Q8WUM0 1156 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 FOXD4L4Q8WXT5 416 aaPredicted RBP10.4□□□□□ -0.74
SMC6-204ENST00000428868 MTA3Q9BTC8 594 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 GGA3Q9NZ52 723 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 PI4KBQ9UBF8 816 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 SWAP70Q9UH65 585 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 SLC12A7Q9Y666 1083 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 TRPM7Q96QT4 1865 aa10.4□□□□□ -0.75
SMC6-204ENST00000428868 PLEKHA8P1O95397 391 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 FDPSP14324 419 aaKnown RBP10.39□□□□□ -0.75
SMC6-204ENST00000428868 TROAPQ12815 778 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 RAB3GAP1Q15042 981 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 TATDN1Q6P1N9 297 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 MIGA2Q7L4E1 593 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 LRRC47Q8N1G4 583 aaKnown RBP10.39□□□□□ -0.75
SMC6-204ENST00000428868 PHKBQ93100 1093 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 TCP11L1Q9NUJ3 509 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 FZD1Q9UP38 647 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 MTMR7Q9Y216 660 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.39□□□□□ -0.75
SMC6-204ENST00000428868 RLFQ13129 1914 aa10.39□□□□□ -0.75
SMC6-204ENST00000428868 POTECB2RU33 542 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 MPHOSPH10O00566 681 aaKnown RBP10.38□□□□□ -0.75
SMC6-204ENST00000428868 SYT1P21579 422 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 NOVP48745 357 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 MMP14P50281 582 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 SEPT2Q15019 361 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 RTN1Q16799 776 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 SLC35G1Q2M3R5 365 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 CERKLQ49MI3 558 aaPredicted RBP10.38□□□□□ -0.75
SMC6-204ENST00000428868 NBPF12Q5TAG4 269 aaPredicted RBP10.38□□□□□ -0.75
SMC6-204ENST00000428868 ANKS1AQ92625 1134 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 AIFM3Q96NN9 605 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMC6-204ENST00000428868 CWC22Q9HCG8 908 aaKnown RBP10.38□□□□□ -0.75
SMC6-204ENST00000428868 GJB4Q9NTQ9 266 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
SMC6-204ENST00000428868 STX8Q9UNK0 236 aa10.38□□□□□ -0.75
SMC6-204ENST00000428868 RBBP6Q7Z6E9 1792 aaKnown RBP10.37□□□□□ -0.75
SMC6-204ENST00000428868 DDAH1O94760 285 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 BRD1O95696 1058 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 LMOD1P29536 600 aaPredicted RBP10.37□□□□□ -0.75
SMC6-204ENST00000428868 CDC37L1Q7L3B6 337 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 CATIPQ7Z7H3 387 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 NBPF11Q86T75 865 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 CCDC84Q86UT8 332 aaPredicted RBP10.37□□□□□ -0.75
SMC6-204ENST00000428868 DGKHQ86XP1 1220 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 SIAH1Q8IUQ4 282 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 FOXP4Q8IVH2 680 aaPredicted RBP10.37□□□□□ -0.75
SMC6-204ENST00000428868 STAG2Q8N3U4 1231 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 FANCBQ8NB91 859 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 PNMA1Q8ND90 353 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 TNPO1Q92973 898 aaKnown RBP10.37□□□□□ -0.75
SMC6-204ENST00000428868 L3MBTL3Q96JM7 780 aaPredicted RBP10.37□□□□□ -0.75
SMC6-204ENST00000428868 LLPHQ9BRT6 129 aaKnown RBP10.37□□□□□ -0.75
SMC6-204ENST00000428868 TRIM34Q9BYJ4 488 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 DEFB129Q9H1M3 183 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 CPVLQ9H3G5 476 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 KAT14Q9H8E8 782 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 ZNF287Q9HBT7 754 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 ADARB2Q9NS39 739 aaKnown RBP10.37□□□□□ -0.75
SMC6-204ENST00000428868 MTMR4Q9NYA4 1195 aa10.37□□□□□ -0.75
SMC6-204ENST00000428868 CNTNAP5Q8WYK1 1306 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 hCG_1642624A0A1W2PR95 340 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 GLTPD2A6NH11 291 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 ADM5C9JUS6 153 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 GH2P01242 217 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 TNNI2P48788 182 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 GUCY1B3Q02153 619 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 FUT2Q10981 343 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 GRM4Q14833 912 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 ABCB5Q2M3G0 1257 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 OTUD7BQ6GQQ9 843 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 TMTC2Q8N394 836 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 CCDC82Q8N4S0 544 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 SRBD1Q8N5C6 995 aaKnown RBP10.36□□□□□ -0.75
SMC6-204ENST00000428868 SHISA4Q96DD7 197 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 ORC3Q9UBD5 711 aaPredicted RBP10.36□□□□□ -0.75
SMC6-204ENST00000428868 MAD2L2Q9UI95 211 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 HERC5Q9UII4 1024 aaKnown RBP10.36□□□□□ -0.75
SMC6-204ENST00000428868 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 MTMR6Q9Y217 621 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 MYH7BA7E2Y1 1941 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 LOC285556D6RIA3 1793 aa10.36□□□□□ -0.75
SMC6-204ENST00000428868 ZC3H4Q9UPT8 1303 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms