RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SIAH1Q8IUQ4 282 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 ACER1Q8TDN7 264 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 CLIP2Q9UDT6 1046 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 ANGEL1Q9UNK9 670 aaKnown RBP11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 SSC5DA1L4H1 1573 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 ZMYM6O95789 1325 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 FRMPD2Q68DX3 1309 aaPredicted RBP11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 PLEKHA8P1O95397 391 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 HLA-DOAP06340 250 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 GUCY1B3Q02153 619 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 CERKLQ49MI3 558 aaPredicted RBP11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 TTC6Q86TZ1 520 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 MTMR14Q8NCE2 650 aa11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 ISY1Q9ULR0 285 aaKnown RBP11.18□□□□□ -0.62
HMGCLL1-206ENST00000428842 ATRNL1Q5VV63 1379 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 MKRN3Q13064 507 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 WTAPQ15007 396 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 USP17L2Q6R6M4 530 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 AMOTL1Q8IY63 956 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 IL17RAQ96F46 866 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 CLMNQ96JQ2 1002 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 TRIM34Q9BYJ4 488 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 KRT23Q9C075 422 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 PEX10O60683 326 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 FGRP09769 529 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 IFIT1BQ5T764 474 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 SNX21Q969T3 373 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 TMEM47Q9BQJ4 181 aa11.17□□□□□ -0.62
HMGCLL1-206ENST00000428842 SLC16A2P36021 539 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 SLC35G1Q2M3R5 365 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 UBA5Q9GZZ9 404 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 ROBO3Q96MS0 1386 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 USP17L5A8MUK1 530 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 ADAMTS3O15072 1205 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 EPB41L2O43491 1005 aaKnown RBP11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 ORC4O43929 436 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 ENTPD3O75355 529 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 EEF2P13639 858 aaKnown RBP11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 KCTD1Q719H9 257 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 WRNIP1Q96S55 665 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 CNNM2Q9H8M5 875 aa11.16□□□□□ -0.62
HMGCLL1-206ENST00000428842 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 PHF20L1A8MW92 1017 aa11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 TTBK2Q6IQ55 1244 aa11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 IQCA1Q86XH1 822 aa11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 ZNF654Q8IZM8 581 aa11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 DCPSQ96C86 337 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 L3MBTL3Q96JM7 780 aaPredicted RBP11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 VAT1LQ9HCJ6 419 aa11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 SLC12A7Q9Y666 1083 aa11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 MYH4Q9Y623 1939 aa11.15□□□□□ -0.62
HMGCLL1-206ENST00000428842 SLC3A2P08195 630 aaKnown RBP11.15□□□□□ -0.63
HMGCLL1-206ENST00000428842 GJB2P29033 226 aa11.15□□□□□ -0.63
HMGCLL1-206ENST00000428842 ABCB5Q2M3G0 1257 aa11.15□□□□□ -0.63
HMGCLL1-206ENST00000428842 FERMT3Q86UX7 667 aa11.15□□□□□ -0.63
HMGCLL1-206ENST00000428842 SULF1Q8IWU6 871 aa11.15□□□□□ -0.63
HMGCLL1-206ENST00000428842 PNMA1Q8ND90 353 aa11.15□□□□□ -0.63
HMGCLL1-206ENST00000428842 GTF3C6Q969F1 213 aa11.15□□□□□ -0.63
HMGCLL1-206ENST00000428842 AGXT2Q9BYV1 514 aa11.15□□□□□ -0.63
HMGCLL1-206ENST00000428842 MTMR4Q9NYA4 1195 aa11.15□□□□□ -0.63
HMGCLL1-206ENST00000428842 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 HMGB1P09429 215 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 METAP2P50579 478 aaKnown RBP eCLIP11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 TROAPQ12815 778 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 TATDN1Q6P1N9 297 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 DHX36Q9H2U1 1008 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 GPCPD1Q9NPB8 672 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 ERICH2A1L162 156 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 TRIM75PA6NK02 468 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 GOLGA8AA7E2F4 631 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 ZBTB43O43298 467 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 FDPSP14324 419 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 TTLL12Q14166 644 aaPredicted RBP11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 FAM83AQ86UY5 434 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 NEDD1Q8NHV4 660 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
HMGCLL1-206ENST00000428842 CDCA5Q96FF9 252 aa11.13□□□□□ -0.63
HMGCLL1-206ENST00000428842 ZDHHC9Q9Y397 364 aa11.13□□□□□ -0.63
HMGCLL1-206ENST00000428842 PTPDC1A2A3K4 754 aa11.13□□□□□ -0.63
HMGCLL1-206ENST00000428842 ICA1Q05084 483 aa11.13□□□□□ -0.63
HMGCLL1-206ENST00000428842 SRBD1Q8N5C6 995 aaKnown RBP11.13□□□□□ -0.63
HMGCLL1-206ENST00000428842 NSUN7Q8NE18 718 aaKnown RBP11.13□□□□□ -0.63
HMGCLL1-206ENST00000428842 KAT14Q9H8E8 782 aa11.13□□□□□ -0.63
HMGCLL1-206ENST00000428842 ZBTB21Q9ULJ3 1066 aa11.13□□□□□ -0.63
HMGCLL1-206ENST00000428842 USP2O75604 605 aaPredicted RBP11.12□□□□□ -0.63
HMGCLL1-206ENST00000428842 CAP2P40123 477 aa11.12□□□□□ -0.63
HMGCLL1-206ENST00000428842 TNNI2P48788 182 aa11.12□□□□□ -0.63
HMGCLL1-206ENST00000428842 HOMER1Q86YM7 354 aa11.12□□□□□ -0.63
HMGCLL1-206ENST00000428842 FANCBQ8NB91 859 aa11.12□□□□□ -0.63
HMGCLL1-206ENST00000428842 FBXO28Q9NVF7 368 aa11.12□□□□□ -0.63
HMGCLL1-206ENST00000428842 CYTH3O43739 400 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 PFKFB2O60825 505 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 CUL4AQ13619 759 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 TNFAIP1Q13829 316 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms