RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 VCX3BQ9H321 246 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 RTEL1Q9NZ71 1219 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 TRIM14Q14142 442 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 MED10Q9BTT4 135 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 CLSTN2Q9H4D0 955 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 ARMT1Q9H993 441 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 CD19P15391 556 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 RXRAP19793 462 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 ADCY7P51828 1080 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 PABPC4Q13310 644 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTNND1-208ENST00000428599 LPIN2Q92539 896 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 CTNND2Q9UQB3 1225 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 UTP11Q9Y3A2 253 aaKnown RBP9.93□□□□□ -0.82
CTNND1-208ENST00000428599 TTLL3Q9Y4R7 772 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 ESYT2A0FGR8 921 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 SPDYE16A6NNV3 312 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-208ENST00000428599 KIF3CO14782 793 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 SLC1A4P43007 532 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 SPDYE2Q495Y8 402 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 CCDC122Q5T0U0 273 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 LZTFL1Q9NQ48 299 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 ABCC3O15438 1527 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 GKAP1Q5VSY0 366 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 CCDC186Q7Z3E2 898 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 ZFP91Q96JP5 570 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 FEZ2Q9UHY8 353 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 ATP7BP35670 1465 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 PNMA6EA0A0J9YXQ4 647 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 NEURL1BA8MQ27 555 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 PFDN6O15212 129 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 DEXIO95424 95 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 ATF7P17544 494 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 ALDH1B1P30837 517 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 TNFAIP1Q13829 316 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 CASC4Q6P4E1 433 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 OTUD6AQ7L8S5 288 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 CPXCR1Q8N123 301 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 EBAG9O00559 213 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 ZEB2O60315 1214 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 KARSQ15046 597 aaKnown RBP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 DLGAP5Q15398 846 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 ARHGEF25Q86VW2 580 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 CEP120Q8N960 986 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 DNM3Q9UQ16 869 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 ELP1O95163 1332 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 MROH5Q6ZUA9 1318 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 AK2P54819 239 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 NBPF11Q86T75 865 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 TEKT1Q969V4 418 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 VCXQ9H320 206 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 ANKFY1Q9P2R3 1169 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 USP6P35125 1406 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 I3L4J1 428 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 YARSP54577 528 aaKnown RBP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 OTUD7AQ8TE49 926 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 GLG1Q92896 1179 aa9.92□□□□□ -0.82
CTNND1-208ENST00000428599 MRRFQ96E11 262 aaKnown RBP9.92□□□□□ -0.82
CTNND1-208ENST00000428599 BCRP11274 1271 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 GNPTABQ3T906 1256 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 ATL3Q6DD88 541 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 OTUD7BQ6GQQ9 843 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 MAEAQ7L5Y9 396 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 CACNA2D3Q8IZS8 1091 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 LZTS2Q9BRK4 669 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 USTQ9Y2C2 406 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 TTLL7Q6ZT98 887 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 SEPT14Q6ZU15 432 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 RUFY3Q7L099 469 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 MYCT1Q8N699 235 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 TMEM87BQ96K49 555 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 AATFQ9NY61 560 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTNND1-208ENST00000428599 PRKAG2Q9UGJ0 569 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 AKR1B15C9JRZ8 316 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-208ENST00000428599 CTSWP56202 376 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 DNM1Q05193 864 aaKnown RBP9.91□□□□□ -0.82
CTNND1-208ENST00000428599 TBC1D8BQ0IIM8 1120 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 CROCCP2Q86T23 111 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 RNF169Q8NCN4 708 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 GOLGA8CPA6NN73 597 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 TXKP42681 527 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 ATP11AP98196 1134 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 PIK3AP1Q6ZUJ8 805 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 MLXIPQ9HAP2 919 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 CTTNBP2NLQ9P2B4 639 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 TRPC6Q9Y210 931 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 PSMD6Q15008 389 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 KRT25Q7Z3Z0 450 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 CEP57Q86XR8 500 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 FAM76AQ8TAV0 307 aa9.91□□□□□ -0.82
CTNND1-208ENST00000428599 ZNF277Q9NRM2 450 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-208ENST00000428599 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 B4E1Z4 1266 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 EXOC3O60645 756 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 ABL1P00519 1130 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 SIK1P57059 783 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 APPBP2Q92624 585 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 CAPN2P17655 700 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms