RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CCDC121Q6ZUS5 278 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 ARL8AQ96BM9 186 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 MAP3K14Q99558 947 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-206ENST00000428313 HOMER3Q9NSC5 361 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 TPX2Q9ULW0 747 aaKnown RBP18.07■□□□□ 0.48
C9orf3-206ENST00000428313 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-206ENST00000428313 WDR17Q8IZU2 1322 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 PPP1R37O75864 691 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 GBP2P32456 591 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-206ENST00000428313 ITIH3Q06033 890 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 SEMA3FQ13275 785 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 CDKAL1Q5VV42 579 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 CDCA2Q69YH5 1023 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-206ENST00000428313 NLRP14Q86W24 1093 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 CCDC26Q8TAB7 109 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 MYCBPAPQ8TBZ2 947 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 CAVIN3Q969G5 261 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 FAM210AQ96ND0 272 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 HDAC6Q9UBN7 1215 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 ANO9A1A5B4 782 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 FAM107AO95990 144 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 NNTQ13423 1086 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 FAM43BQ6ZT52 329 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-206ENST00000428313 TICAM2Q86XR7 235 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 EDC3Q96F86 508 aaKnown RBP18.06■□□□□ 0.48
C9orf3-206ENST00000428313 CCT8L2Q96SF2 557 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 SH3BP1Q9Y3L3 701 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 METP08581 1390 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 FOXN1O15353 648 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 TNFRSF8P28908 595 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 IFT88Q13099 833 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 TTC39AQ5SRH9 613 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 C1orf131Q8NDD1 294 aaKnown RBP18.06■□□□□ 0.48
C9orf3-206ENST00000428313 JAKMIP2Q96AA8 810 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 SLF1Q9BQI6 1058 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 GUCA1BQ9UMX6 200 aa18.06■□□□□ 0.48
C9orf3-206ENST00000428313 DDX60Q8IY21 1712 aaKnown RBP18.06■□□□□ 0.48
C9orf3-206ENST00000428313 C4AP0C0L4 1744 aa18.05■□□□□ 0.48
C9orf3-206ENST00000428313 C4BP0C0L5 1744 aa18.05■□□□□ 0.48
C9orf3-206ENST00000428313 TEFQ10587 303 aa18.05■□□□□ 0.48
C9orf3-206ENST00000428313 TTLL7Q6ZT98 887 aa18.05■□□□□ 0.48
C9orf3-206ENST00000428313 ZNF572Q7Z3I7 529 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-206ENST00000428313 CAGE1Q8TC20 777 aa18.05■□□□□ 0.48
C9orf3-206ENST00000428313 RRP36Q96EU6 259 aaKnown RBP18.05■□□□□ 0.48
C9orf3-206ENST00000428313 RBBP5Q15291 538 aaKnown RBP18.05■□□□□ 0.48
C9orf3-206ENST00000428313 KANK3Q6NY19 840 aa18.05■□□□□ 0.48
C9orf3-206ENST00000428313 IL17REQ8NFR9 667 aa18.05■□□□□ 0.48
C9orf3-206ENST00000428313 RNPC3Q96LT9 517 aaKnown RBP18.05■□□□□ 0.48
C9orf3-206ENST00000428313 CHPF2Q9P2E5 772 aa18.05■□□□□ 0.48
C9orf3-206ENST00000428313 UTYO14607 1347 aa18.04■□□□□ 0.48
C9orf3-206ENST00000428313 ENC1O14682 589 aa18.04■□□□□ 0.48
C9orf3-206ENST00000428313 XRCC4Q13426 336 aa18.04■□□□□ 0.48
C9orf3-206ENST00000428313 NBPF5PQ86XG9 351 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-206ENST00000428313 SPATA20Q8TB22 786 aa18.04■□□□□ 0.48
C9orf3-206ENST00000428313 SCLT1Q96NL6 688 aa18.04■□□□□ 0.48
C9orf3-206ENST00000428313 HELLSQ9NRZ9 838 aa18.04■□□□□ 0.48
C9orf3-206ENST00000428313 REXO2Q9Y3B8 237 aaKnown RBP18.04■□□□□ 0.48
C9orf3-206ENST00000428313 EPN1Q9Y6I3 576 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-206ENST00000428313 SLIT1O75093 1534 aa18.04■□□□□ 0.48
C9orf3-206ENST00000428313 FLT4P35916 1363 aa18.04■□□□□ 0.48
C9orf3-206ENST00000428313 MGRN1O60291 552 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 NDUFA10O95299 355 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 TRAF1Q13077 416 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.03■□□□□ 0.48
C9orf3-206ENST00000428313 KRI1Q8N9T8 703 aaKnown RBP18.03■□□□□ 0.48
C9orf3-206ENST00000428313 P3H4Q92791 437 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 CAPZA3Q96KX2 299 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 DIP2AQ14689 1571 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 KDM3BQ7LBC6 1761 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 FRMD3A2A2Y4 597 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 SRGAP2O75044 1071 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 HDLBPQ00341 1268 aaKnown RBP18.03■□□□□ 0.48
C9orf3-206ENST00000428313 VPS37DQ86XT2 251 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 SYNRGQ9UMZ2 1314 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 USP6P35125 1406 aa18.03■□□□□ 0.48
C9orf3-206ENST00000428313 SNUPNO95149 360 aaKnown RBP18.02■□□□□ 0.48
C9orf3-206ENST00000428313 ATP1A2P50993 1020 aa18.02■□□□□ 0.48
C9orf3-206ENST00000428313 SLMAPQ14BN4 828 aa18.02■□□□□ 0.48
C9orf3-206ENST00000428313 LACTB2Q53H82 288 aaPredicted RBP18.02■□□□□ 0.48
C9orf3-206ENST00000428313 CD302Q8IX05 232 aa18.02■□□□□ 0.48
C9orf3-206ENST00000428313 MICAL1Q8TDZ2 1067 aa18.02■□□□□ 0.48
C9orf3-206ENST00000428313 SAAL1Q96ER3 474 aa18.02■□□□□ 0.48
C9orf3-206ENST00000428313 PRR36Q9H6K5 1346 aa18.02■□□□□ 0.48
C9orf3-206ENST00000428313 PALLDQ8WX93 1383 aa18.02■□□□□ 0.48
C9orf3-206ENST00000428313 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.47
C9orf3-206ENST00000428313 CPLX1O14810 134 aa18.02■□□□□ 0.47
C9orf3-206ENST00000428313 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.47
C9orf3-206ENST00000428313 MDH1P40925 334 aaKnown RBP18.02■□□□□ 0.47
C9orf3-206ENST00000428313 ZNF827Q17R98 1081 aa18.02■□□□□ 0.47
C9orf3-206ENST00000428313 ANKRD20A8PQ5CZ79 823 aa18.02■□□□□ 0.47
C9orf3-206ENST00000428313 PPP4R3AQ6IN85 833 aa18.02■□□□□ 0.47
C9orf3-206ENST00000428313 FNBP4Q8N3X1 1017 aaPredicted RBP18.02■□□□□ 0.47
C9orf3-206ENST00000428313 TSEN2Q8NCE0 465 aaKnown RBP18.02■□□□□ 0.47
C9orf3-206ENST00000428313 RASSF8Q8NHQ8 419 aa18.02■□□□□ 0.47
C9orf3-206ENST00000428313 TCP11Q8WWU5 503 aa18.02■□□□□ 0.47
C9orf3-206ENST00000428313 HAUS7Q99871 368 aa18.02■□□□□ 0.47
C9orf3-206ENST00000428313 KIF9Q9HAQ2 790 aa18.02■□□□□ 0.47
C9orf3-206ENST00000428313 HPS5Q9UPZ3 1129 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms