RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 RFC4P35249 363 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 GLIPR1L2Q4G1C9 344 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 TRAPPC3LQ5T215 181 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 DGKHQ86XP1 1220 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 SMARCE1Q969G3 411 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 V9GY48 417 aaPredicted RBP23.02■■□□□ 1.28
PMPCB-202ENST00000428154 PSDA5PKW4 1024 aaPredicted RBP23.01■■□□□ 1.27
PMPCB-202ENST00000428154 WTIPA6NIX2 430 aaPredicted RBP23.01■■□□□ 1.27
PMPCB-202ENST00000428154 CTIFO43310 598 aaKnown RBP23.01■■□□□ 1.27
PMPCB-202ENST00000428154 BAG3O95817 575 aa23.01■■□□□ 1.27
PMPCB-202ENST00000428154 CNTNAP5Q8WYK1 1306 aa23.01■■□□□ 1.27
PMPCB-202ENST00000428154 ROBO3Q96MS0 1386 aa23.01■■□□□ 1.27
PMPCB-202ENST00000428154 RIOK3O14730 519 aaKnown RBP23■■□□□ 1.27
PMPCB-202ENST00000428154 POLR2DO15514 142 aaKnown RBP23■■□□□ 1.27
PMPCB-202ENST00000428154 GNAQP50148 359 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 PPP4CP60510 307 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 TMC6Q7Z403 805 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 CMTR1Q8N1G2 835 aaKnown RBP23■■□□□ 1.27
PMPCB-202ENST00000428154 SPATA20Q8TB22 786 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 OXER1Q8TDS5 423 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 SH3GLB2Q9NR46 395 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 TFCP2L1Q9NZI6 479 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 VPS54Q9P1Q0 977 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 USP21Q9UK80 565 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 XDHP47989 1333 aa23■■□□□ 1.27
PMPCB-202ENST00000428154 CYP2D7A0A087X1C5 515 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 NPHP1O15259 732 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 LDHBP07195 334 aaKnown RBP22.99■■□□□ 1.27
PMPCB-202ENST00000428154 HMGB2P26583 209 aaKnown RBP22.99■■□□□ 1.27
PMPCB-202ENST00000428154 KLRK1P26718 216 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 CALML3P27482 149 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 PRDX5P30044 214 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 UBASH3AP57075 661 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 PTPN14Q15678 1187 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 ZNF804AQ7Z570 1209 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 ENOX1Q8TC92 643 aaKnown RBP22.99■■□□□ 1.27
PMPCB-202ENST00000428154 C16orf45Q96MC5 204 aaPredicted RBP22.99■■□□□ 1.27
PMPCB-202ENST00000428154 TSPY2A6NKD2 308 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 PLEKHA8P1O95397 391 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 LMOD1P29536 600 aaPredicted RBP22.99■■□□□ 1.27
PMPCB-202ENST00000428154 MORC3Q14149 939 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 NYAP1Q6ZVC0 841 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 FOXP4Q8IVH2 680 aaPredicted RBP22.99■■□□□ 1.27
PMPCB-202ENST00000428154 CCAR2Q8N163 923 aaKnown RBP22.99■■□□□ 1.27
PMPCB-202ENST00000428154 TNFRSF25Q93038 417 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 HSD3B7Q9H2F3 369 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 ZNF287Q9HBT7 754 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 TCP11L1Q9NUJ3 509 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 MAN1B1Q9UKM7 699 aa22.99■■□□□ 1.27
PMPCB-202ENST00000428154 ACTN4O43707 911 aaKnown RBP22.98■■□□□ 1.27
PMPCB-202ENST00000428154 SERPINC1P01008 464 aa22.98■■□□□ 1.27
PMPCB-202ENST00000428154 SCG2P13521 617 aa22.98■■□□□ 1.27
PMPCB-202ENST00000428154 ERCC5P28715 1186 aaPredicted RBP22.98■■□□□ 1.27
PMPCB-202ENST00000428154 KCNQ4P56696 695 aa22.98■■□□□ 1.27
PMPCB-202ENST00000428154 PFKFB3Q16875 520 aaPredicted RBP22.98■■□□□ 1.27
PMPCB-202ENST00000428154 CEP135Q66GS9 1140 aa22.98■■□□□ 1.27
PMPCB-202ENST00000428154 SERTAD1Q9UHV2 236 aa22.98■■□□□ 1.27
PMPCB-202ENST00000428154 TAOK2Q9UL54 1235 aa22.98■■□□□ 1.27
PMPCB-202ENST00000428154 PRDM1O75626 825 aa22.97■■□□□ 1.27
PMPCB-202ENST00000428154 RBM10P98175 930 aaKnown RBP22.97■■□□□ 1.27
PMPCB-202ENST00000428154 C12orf60Q5U649 245 aa22.97■■□□□ 1.27
PMPCB-202ENST00000428154 CSRNP2Q9H175 543 aa22.97■■□□□ 1.27
PMPCB-202ENST00000428154 MKRN1Q9UHC7 482 aaKnown RBP22.97■■□□□ 1.27
PMPCB-202ENST00000428154 TNRC6CQ9HCJ0 1690 aaKnown RBP22.97■■□□□ 1.27
PMPCB-202ENST00000428154 KAT14Q9H8E8 782 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 MCM9Q9NXL9 1143 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 ANKIB1Q9P2G1 1089 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 SBF2Q86WG5 1849 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 SLFN14P0C7P3 912 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 ATP2C1P98194 919 aaPredicted RBP22.96■■□□□ 1.27
PMPCB-202ENST00000428154 ARID5BQ14865 1188 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 TTC38Q5R3I4 469 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 GALNT17Q6IS24 598 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 SRBD1Q8N5C6 995 aaKnown RBP22.96■■□□□ 1.27
PMPCB-202ENST00000428154 CNBD1Q8NA66 436 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 CERKQ8TCT0 537 aa22.96■■□□□ 1.27
PMPCB-202ENST00000428154 USP5P45974 858 aa22.95■■□□□ 1.26
PMPCB-202ENST00000428154 FCHSD1Q86WN1 690 aa22.95■■□□□ 1.26
PMPCB-202ENST00000428154 VSTM4Q8IW00 320 aa22.95■■□□□ 1.26
PMPCB-202ENST00000428154 GRIN1Q05586 938 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 CFAP100Q494V2 611 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 ISM2Q6H9L7 571 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 ARMCX5Q6P1M9 558 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 PTF1AQ7RTS3 328 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 SH3RF1Q7Z6J0 888 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 SHISA4Q96DD7 197 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 LZTS2Q9BRK4 669 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 UBAP1LF5GYI3 381 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 ATP2B4P23634 1241 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 NLRP5P59047 1200 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 NPY5RQ15761 445 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 SPECC1Q5M775 1068 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 ARL6IP4Q66PJ3 421 aaKnown RBP22.94■■□□□ 1.26
PMPCB-202ENST00000428154 GSDMAQ96QA5 445 aa22.94■■□□□ 1.26
PMPCB-202ENST00000428154 SMIM22K7EJ46 135 aa22.93■■□□□ 1.26
PMPCB-202ENST00000428154 PLCG2P16885 1265 aa22.93■■□□□ 1.26
PMPCB-202ENST00000428154 PLCD1P51178 756 aa22.93■■□□□ 1.26
PMPCB-202ENST00000428154 NFIXQ14938 502 aa22.93■■□□□ 1.26
PMPCB-202ENST00000428154 RCSD1Q6JBY9 416 aa22.93■■□□□ 1.26
PMPCB-202ENST00000428154 TXNRD3Q86VQ6 643 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms