RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TRIM74Q86UV6 250 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 TRIM73Q86UV7 250 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 TMTC1Q8IUR5 882 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 NUTM2AQ8IVF1 878 aaPredicted RBP6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 CCDC155Q8N6L0 562 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 FSIP1Q8NA03 581 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 NKX2-3Q8TAU0 364 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 WDR66Q8TBY9 1149 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 LMBR1Q8WVP7 490 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 DYDC1Q8WWB3 177 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 IQCDQ96DY2 449 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 CHAMP1Q96JM3 812 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 SCLT1Q96NL6 688 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 MPHOSPH6Q99547 160 aaKnown RBP6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 MMTAG2Q9BU76 263 aaKnown RBP6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 VCX3BQ9H321 246 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 KAT14Q9H8E8 782 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 VCX3AQ9NNX9 186 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 SLC40A1Q9NP59 571 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 NUB1Q9Y5A7 615 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 ABCA8O94911 1581 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 IFT172Q9UG01 1749 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 CEMIPQ8WUJ3 1361 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 ATP7AQ04656 1500 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 DEPDC5O75140 1603 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 TARBP1Q13395 1621 aaKnown RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 OVOS2A0A0G2JMS6 1433 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 OVOS2A0A0J9YW53 1432 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 RASSF10A6NK89 507 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 AKR1B15C9JRZ8 316 aaPredicted RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 STXBP3O00186 592 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 GPR37O15354 613 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 PHACTR2O75167 634 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 GSTA2P09210 222 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 DESP17661 470 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 FECHP22830 423 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 TNFRSF8P28908 595 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 RAB27AP51159 221 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 CCNHP51946 323 aaPredicted RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 USP14P54578 494 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 VSNL1P62760 191 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 PSMD2Q13200 908 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 XRCC4Q13426 336 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 HIC1Q14526 733 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 IMMTQ16891 758 aaKnown RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 GLE1Q53GS7 698 aaKnown RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 LACTB2Q53H82 288 aaPredicted RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 ACBD5Q5T8D3 534 aaPredicted RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 CDCA2Q69YH5 1023 aaPredicted RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 CWF19L1Q69YN2 538 aaKnown RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 SMYD5Q6GMV2 418 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 OVOS2Q6IE36 1432 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 PPP4R3AQ6IN85 833 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 PRPF40BQ6NWY9 871 aaKnown RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 PPP1R18Q6NYC8 613 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 TLDC1Q6P9B6 456 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 NFXL1Q6ZNB6 911 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 TTLL7Q6ZT98 887 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 CROCCP2Q86T23 111 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 FNBP4Q8N3X1 1017 aaPredicted RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 TRIML1Q8N9V2 468 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 PXYLP1Q8TE99 480 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 ANKRD24Q8TF21 1146 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 CUL5Q93034 780 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 JAKMIP2Q96AA8 810 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 IFT74Q96LB3 600 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 SH3GL2Q99962 352 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 CCDC28BQ9BUN5 200 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 TRIM7Q9C029 511 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 KDM4CQ9H3R0 1056 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 EBF2Q9HAK2 575 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 KIF9Q9HAQ2 790 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 PAPOLBQ9NRJ5 636 aaKnown RBP6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 RIMS2Q9UQ26 1411 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 GMEB1Q9Y692 573 aa6.29□□□□□ -1.4
VTI1BP4-201ENST00000427516 ATP10BO94823 1461 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 CRYBG1Q9Y4K1 1723 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 ADGRB1O14514 1584 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 CEP104O60308 925 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 CCND1P24385 295 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 VAV2P52735 878 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 COPS2P61201 443 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 RESTQ13127 1097 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 ARID5BQ14865 1188 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 TPRNQ4KMQ1 711 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 AMOTQ4VCS5 1084 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 PLEKHO1Q53GL0 409 aaPredicted RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 CMPK2Q5EBM0 449 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 RRP12Q5JTH9 1297 aaKnown RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 CFAP58Q5T655 872 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 CCDC181Q5TID7 509 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 GKAP1Q5VSY0 366 aaPredicted RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 HHATQ5VTY9 493 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 KANK3Q6NY19 840 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 FOXR1Q6PIV2 292 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 RUFY4Q6ZNE9 571 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 HDGFL2Q7Z4V5 671 aaPredicted RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 NCAPG2Q86XI2 1143 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 FAM114A1Q8IWE2 563 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms