RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 ABCB5Q2M3G0 1257 aa19.28■□□□□ 0.68
HLA-DQB2-230ENST00000427449 CERKLQ49MI3 558 aaPredicted RBP19.28■□□□□ 0.68
HLA-DQB2-230ENST00000427449 UBE2Q1Q7Z7E8 422 aa19.28■□□□□ 0.68
HLA-DQB2-230ENST00000427449 SMCR8Q8TEV9 937 aaPredicted RBP19.28■□□□□ 0.68
HLA-DQB2-230ENST00000427449 RBPJLQ9UBG7 517 aa19.28■□□□□ 0.68
HLA-DQB2-230ENST00000427449 PLXNA1Q9UIW2 1896 aa19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 M0R2C6 588 aa19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 FMNL1O95466 1100 aaPredicted RBP19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 VCAM1P19320 739 aa19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 GCLCP48506 637 aaPredicted RBP19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 FLT3LGP49771 235 aa19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 ARHGEF6Q15052 776 aa19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 CTR9Q6PD62 1173 aa19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 C16orf86Q6ZW13 317 aa19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.27■□□□□ 0.68
HLA-DQB2-230ENST00000427449 AKR1B1P15121 316 aa19.26■□□□□ 0.67
HLA-DQB2-230ENST00000427449 GRK4P32298 578 aa19.26■□□□□ 0.67
HLA-DQB2-230ENST00000427449 USP17L2Q6R6M4 530 aa19.26■□□□□ 0.67
HLA-DQB2-230ENST00000427449 APPBP2Q92624 585 aa19.26■□□□□ 0.67
HLA-DQB2-230ENST00000427449 TAOK2Q9UL54 1235 aa19.26■□□□□ 0.67
HLA-DQB2-230ENST00000427449 USP17L12C9JPN9 530 aa19.25■□□□□ 0.67
HLA-DQB2-230ENST00000427449 USP17L21D6R901 530 aa19.25■□□□□ 0.67
HLA-DQB2-230ENST00000427449 POLR3DP05423 398 aaPredicted RBP19.25■□□□□ 0.67
HLA-DQB2-230ENST00000427449 Q3C1V9 767 aa19.25■□□□□ 0.67
HLA-DQB2-230ENST00000427449 LBX2Q6XYB7 198 aa19.25■□□□□ 0.67
HLA-DQB2-230ENST00000427449 USP6NLQ92738 828 aa19.25■□□□□ 0.67
HLA-DQB2-230ENST00000427449 SEC62Q99442 399 aaKnown RBP19.25■□□□□ 0.67
HLA-DQB2-230ENST00000427449 TRIM34Q9BYJ4 488 aa19.25■□□□□ 0.67
HLA-DQB2-230ENST00000427449 PORCNQ9H237 461 aa19.25■□□□□ 0.67
HLA-DQB2-230ENST00000427449 ELNP15502 786 aa19.24■□□□□ 0.67
HLA-DQB2-230ENST00000427449 RAB3GAP1Q15042 981 aa19.24■□□□□ 0.67
HLA-DQB2-230ENST00000427449 ZYXQ15942 572 aaKnown RBP19.24■□□□□ 0.67
HLA-DQB2-230ENST00000427449 STAP2Q9UGK3 403 aa19.24■□□□□ 0.67
HLA-DQB2-230ENST00000427449 SWAP70Q9UH65 585 aa19.24■□□□□ 0.67
HLA-DQB2-230ENST00000427449 SLC4A4Q9Y6R1 1079 aa19.24■□□□□ 0.67
HLA-DQB2-230ENST00000427449 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 TNPO2O14787 897 aaKnown RBP19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 RNF113AO15541 343 aaKnown RBP19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 MX1P20591 662 aa19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 CDK8P49336 464 aa19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 PABPC4Q13310 644 aaKnown RBP eCLIP19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 SBK1Q52WX2 424 aa19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 CATSPERGQ6ZRH7 1159 aa19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 SMC5Q8IY18 1101 aa19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 SLAIN1Q8ND83 568 aa19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 PXYLP1Q8TE99 480 aa19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 TMOD4Q9NZQ9 345 aa19.23■□□□□ 0.67
HLA-DQB2-230ENST00000427449 GPAA1O43292 621 aa19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 MYCP01106 439 aaPredicted RBP19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 IGHA2P01877 340 aa19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 ERVK-9P63128 1117 aa19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 ERVK-24P63145 666 aa19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 ZMYM1Q5SVZ6 1142 aa19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 TMEM179Q6ZVK1 233 aa19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 RAET1EQ8TD07 263 aa19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 UNC93B1Q9H1C4 597 aa19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 BTBD7Q9P203 1132 aa19.22■□□□□ 0.67
HLA-DQB2-230ENST00000427449 DNAH12Q6ZR08 3092 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 ADCY3O60266 1144 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 GLRX3O76003 335 aaKnown RBP19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 IGHDP01880 384 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 INHAP05111 366 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 CCL5P13501 91 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 RASA1P20936 1047 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 HOXD10P28358 340 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 IRX3P78415 501 aaPredicted RBP19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 TRIM32Q13049 653 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 ZSCAN25Q6NSZ9 544 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 NBPF11Q86T75 865 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 PAK6Q9NQU5 681 aaPredicted RBP19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 LCTP09848 1927 aa19.21■□□□□ 0.67
HLA-DQB2-230ENST00000427449 RANBP2P49792 3224 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 IGKV6D-41A0A0C4DH26 115 aa19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 MORN1Q5T089 497 aa19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 GIMAP6Q6P9H5 292 aa19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 EXOC6Q8TAG9 804 aa19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 TRIB2Q92519 343 aa19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 GPATCH3Q96I76 525 aa19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 RPAP3Q9H6T3 665 aaPredicted RBP19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 ARPP21Q9UBL0 812 aaPredicted RBP19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 TMX2Q9Y320 296 aa19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 TACC3Q9Y6A5 838 aa19.2■□□□□ 0.66
HLA-DQB2-230ENST00000427449 PLIN4Q96Q06 1357 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP17L15C9J2P7 530 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP17L13C9JLJ4 530 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP17L11C9JVI0 530 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP17L18D6R9N7 530 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP17L22D6RA61 530 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP17L17D6RBQ6 530 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP17L19D6RCP7 530 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP17L20D6RJB6 530 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 ZFYP08048 801 aaPredicted RBP19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 GJA8P48165 433 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 PDE1AP54750 535 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP17L24Q0WX57 530 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 MAP3K21Q5TCX8 1036 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 PRPF38BQ5VTL8 546 aaKnown RBP19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 GCC1Q96CN9 775 aa19.19■□□□□ 0.66
HLA-DQB2-230ENST00000427449 FEZ1Q99689 392 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms