RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 HSPA1LP34931 641 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 VMP1Q96GC9 406 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 SIN3AQ96ST3 1273 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 SYTL2Q9HCH5 934 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 I3L4J1 428 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 POLR2FP61218 127 aaKnown RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 CDR2Q01850 454 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 USH1GQ495M9 461 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 KRT80Q6KB66 452 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 PDRG1Q9NUG6 133 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 PPP6R1Q9UPN7 881 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 SMARCA4P51532 1647 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 ATP5HO75947 161 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 ARHGAP4P98171 946 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 SPATA1Q5VX52 437 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 CCDC26Q8TAB7 109 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 FGFR1OP2Q9NVK5 253 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 RGL1Q9NZL6 768 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 STOML1Q9UBI4 398 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 MYO1CO00159 1063 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 CLASP2O75122 1294 aaKnown RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 SLC4A1P02730 911 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 GNAT2P19087 354 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 PDE6BP35913 854 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 ZNF574Q6ZN55 896 aaPredicted RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 ITFG2Q969R8 447 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 MIA2Q96PC5 1412 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 NAF1Q96HR8 494 aaKnown RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 DNAI1Q9UI46 699 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 RASGRF2O14827 1237 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 SUN1O94901 812 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 EEF2P13639 858 aaKnown RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 GARSP41250 739 aaKnown RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 PRR23BQ6ZRT6 265 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 NUP88Q99567 741 aaPredicted RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 TANGO6Q9C0B7 1094 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 FANCEQ9HB96 536 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 SLC4A7Q9Y6M7 1214 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 POLA1P09884 1462 aaPredicted RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 EPB41P11171 864 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 CNGA3Q16281 694 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 SMYD5Q6GMV2 418 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 TRMT44Q8IYL2 757 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 SKA1Q96BD8 255 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 PDCD10Q9BUL8 212 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 CAND2O75155 1236 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 ERMNQ8TAM6 284 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 PRR23AA6NEV1 266 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 DDIT3P35638 169 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 KLHL12Q53G59 568 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 PM20D2Q8IYS1 436 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 FAM9CQ8IZT9 166 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 MPNDQ8N594 471 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 BCAS4Q8TDM0 211 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 ANKRD2Q9GZV1 360 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 MRPL40Q9NQ50 206 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 BZW2Q9Y6E2 419 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 E7EVH7 732 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 FOSP01100 380 aaPredicted RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 KIF9Q9HAQ2 790 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 VIL1P09327 827 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 RIPPLY1Q0D2K3 151 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 GEN1Q17RS7 908 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 FRA10AC1Q70Z53 315 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 LRRC49Q8IUZ0 686 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 PHACTR3Q96KR7 559 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 CATSPER2Q96P56 530 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 CHMP1AQ9HD42 196 aaPredicted RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 DHX29Q7Z478 1369 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 PHACTR2O75167 634 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 PUDPQ08623 228 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 TRIM56Q9BRZ2 755 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 CACYBPQ9HB71 228 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 ARHGAP26Q9UNA1 814 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 MORC2Q9Y6X9 1032 aaPredicted RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 PYGMP11217 842 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 MRPS9P82933 396 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 RNF207Q6ZRF8 634 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 TSHZ1Q6ZSZ6 1077 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 CNTROBQ8N137 903 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 KRT14P02533 472 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 HSP90AA4PQ58FG1 418 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 TDRD7Q8NHU6 1098 aaKnown RBP8.57□□□□□ -1.04
LINC00649-203ENST00000427447 CAPS2Q9BXY5 557 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 RHOBTB2Q9BYZ6 727 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 EID1Q9Y6B2 187 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 ADGBQ8N7X0 1667 aa8.57□□□□□ -1.04
LINC00649-203ENST00000427447 ZNF839A8K0R7 811 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 CRTAPO75718 401 aaPredicted RBP8.56□□□□□ -1.04
LINC00649-203ENST00000427447 PDE9AO76083 593 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 PRLP01236 227 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 FLT3P36888 993 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 CYTH1Q15438 398 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 ZNF280BQ86YH2 543 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 GDAP1Q8TB36 358 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 MYH6P13533 1939 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms