RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 SZT2Q5T011 3432 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L15C9J2P7 530 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L13C9JLJ4 530 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L11C9JVI0 530 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L18D6R9N7 530 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L22D6RA61 530 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L17D6RBQ6 530 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L19D6RCP7 530 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L20D6RJB6 530 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 CNMDO75829 334 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 POLR3DP05423 398 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-213ENST00000427007 ZKSCAN1P17029 563 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-213ENST00000427007 SHMT1P34896 483 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-213ENST00000427007 CACNB2Q08289 660 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L24Q0WX57 530 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 TTF1Q15361 905 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-213ENST00000427007 HSP90AB4PQ58FF6 505 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 SLC9C2Q5TAH2 1124 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 MAP3K21Q5TCX8 1036 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 WDR78Q5VTH9 848 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 PLEKHH3Q7Z736 793 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 GTF3C2Q8WUA4 911 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-213ENST00000427007 C12orf42Q96LP6 360 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 MYH8P13535 1937 aa12.4□□□□□ -0.42
HDLBP-213ENST00000427007 ZNF532Q9HCE3 1301 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 TRIOBPQ9H2D6 2365 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 GOLIM4O00461 696 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 XRCC5P13010 732 aaKnown RBP12.39□□□□□ -0.43
HDLBP-213ENST00000427007 PDE6AP16499 860 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 VCAM1P19320 739 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 CCND3P30281 292 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-213ENST00000427007 GUCY1A2P33402 732 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 RGS2P41220 211 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 USP14P54578 494 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 MORN1Q5T089 497 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 CATSPERGQ6ZRH7 1159 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 CLASRPQ8N2M8 674 aaKnown RBP12.39□□□□□ -0.43
HDLBP-213ENST00000427007 SDR42E1Q8WUS8 393 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 USP6NLQ92738 828 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 KIF1BPQ96EK5 621 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 EDC3Q96F86 508 aaKnown RBP12.39□□□□□ -0.43
HDLBP-213ENST00000427007 CRNKL1Q9BZJ0 848 aaKnown RBP12.39□□□□□ -0.43
HDLBP-213ENST00000427007 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 KIAA1683Q9H0B3 1180 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 C11orf49Q9H6J7 331 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 MCM9Q9NXL9 1143 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 OGDHLQ9ULD0 1010 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 ZMYND8Q9ULU4 1186 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-213ENST00000427007 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
HDLBP-213ENST00000427007 MPHOSPH10O00566 681 aaKnown RBP12.38□□□□□ -0.43
HDLBP-213ENST00000427007 IFIT2P09913 472 aaKnown RBP12.38□□□□□ -0.43
HDLBP-213ENST00000427007 SYN1P17600 705 aa12.38□□□□□ -0.43
HDLBP-213ENST00000427007 SEPT2Q15019 361 aa12.38□□□□□ -0.43
HDLBP-213ENST00000427007 TMED8Q6PL24 325 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-213ENST00000427007 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
HDLBP-213ENST00000427007 LCORLQ8N3X6 602 aa12.38□□□□□ -0.43
HDLBP-213ENST00000427007 APBA2Q99767 749 aa12.38□□□□□ -0.43
HDLBP-213ENST00000427007 RPAP3Q9H6T3 665 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-213ENST00000427007 BTBD7Q9P203 1132 aa12.38□□□□□ -0.43
HDLBP-213ENST00000427007 RABGAP1Q9Y3P9 1069 aa12.38□□□□□ -0.43
HDLBP-213ENST00000427007 RANBP2P49792 3224 aaKnown RBP12.38□□□□□ -0.43
HDLBP-213ENST00000427007 PFASO15067 1338 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 BAZ2AQ9UIF9 1905 aaKnown RBP12.37□□□□□ -0.43
HDLBP-213ENST00000427007 TCRBV5S4A2TA0A5A2 114 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-213ENST00000427007 CYP2D6P10635 497 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 CCNA1P78396 465 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 GABPAQ06546 454 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 MAP2K5Q13163 448 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 SLFNL1Q499Z3 407 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 SIRT2Q8IXJ6 389 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-213ENST00000427007 ARMT1Q9H993 441 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 FLRT1Q9NZU1 646 aa12.37□□□□□ -0.43
HDLBP-213ENST00000427007 A0A1W2PRG0 241 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 SPDYE16A6NNV3 312 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-213ENST00000427007 HMMRO75330 724 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 GLRX3O76003 335 aaKnown RBP12.36□□□□□ -0.43
HDLBP-213ENST00000427007 MS4A1P11836 297 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 PTPREP23469 700 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 LHX8Q68G74 356 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 SLC44A5Q8NCS7 719 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDLBP-213ENST00000427007 DYNLL2Q96FJ2 89 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 LRCH3Q96II8 777 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 BOLA2Q9H3K6 86 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 DCP1AQ9NPI6 582 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-213ENST00000427007 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 MYH7P12883 1935 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 A0A0G2JMZ2 1700 aa12.36□□□□□ -0.43
HDLBP-213ENST00000427007 A0A1W2PPC1 479 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 PRKAB2O43741 272 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 CHGBP05060 677 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 LBX2Q6XYB7 198 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 CLEC10AQ8IUN9 316 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 NPLOC4Q8TAT6 608 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 GDF15Q99988 308 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 TANGO6Q9C0B7 1094 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms