RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 CCND3P30281 292 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-209ENST00000425239 TMED8Q6PL24 325 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-209ENST00000425239 PLEKHH3Q7Z736 793 aa18.27■□□□□ 0.52
ATG4B-209ENST00000425239 CERS3Q8IU89 383 aa18.27■□□□□ 0.52
ATG4B-209ENST00000425239 C7orf61Q8IZ16 206 aa18.27■□□□□ 0.52
ATG4B-209ENST00000425239 GTF3C2Q8WUA4 911 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-209ENST00000425239 FLRT1Q9NZU1 646 aa18.27■□□□□ 0.52
ATG4B-209ENST00000425239 EXOC6BQ9Y2D4 811 aa18.27■□□□□ 0.52
ATG4B-209ENST00000425239 RABGAP1Q9Y3P9 1069 aa18.27■□□□□ 0.52
ATG4B-209ENST00000425239 UNC80Q8N2C7 3258 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 USP17L15C9J2P7 530 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 USP17L13C9JLJ4 530 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 USP17L11C9JVI0 530 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 USP17L18D6R9N7 530 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 USP17L22D6RA61 530 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 USP17L17D6RBQ6 530 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 USP17L19D6RCP7 530 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 USP17L20D6RJB6 530 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 USP17L24Q0WX57 530 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 CERKLQ49MI3 558 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-209ENST00000425239 TRMT44Q8IYL2 757 aaKnown RBP18.26■□□□□ 0.51
ATG4B-209ENST00000425239 PAGR1Q9BTK6 254 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 TRIM34Q9BYJ4 488 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 BTBD7Q9P203 1132 aa18.26■□□□□ 0.51
ATG4B-209ENST00000425239 ZMYND8Q9ULU4 1186 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-209ENST00000425239 VCAM1P19320 739 aa18.25■□□□□ 0.51
ATG4B-209ENST00000425239 RGS2P41220 211 aa18.25■□□□□ 0.51
ATG4B-209ENST00000425239 USP5P45974 858 aa18.25■□□□□ 0.51
ATG4B-209ENST00000425239 MAP3K12Q12852 859 aa18.25■□□□□ 0.51
ATG4B-209ENST00000425239 TTC6Q86TZ1 520 aa18.25■□□□□ 0.51
ATG4B-209ENST00000425239 FTSJ3Q8IY81 847 aaKnown RBP18.25■□□□□ 0.51
ATG4B-209ENST00000425239 RLFQ13129 1914 aa18.25■□□□□ 0.51
ATG4B-209ENST00000425239 A0A1W2PRG0 241 aa18.24■□□□□ 0.51
ATG4B-209ENST00000425239 TCRBV5S4A2TA0A5A2 114 aa18.24■□□□□ 0.51
ATG4B-209ENST00000425239 HOXC6P09630 235 aa18.24■□□□□ 0.51
ATG4B-209ENST00000425239 ZKSCAN1P17029 563 aaPredicted RBP18.24■□□□□ 0.51
ATG4B-209ENST00000425239 MAP2K5Q13163 448 aa18.24■□□□□ 0.51
ATG4B-209ENST00000425239 ZYXQ15942 572 aaKnown RBP18.24■□□□□ 0.51
ATG4B-209ENST00000425239 ABCB5Q2M3G0 1257 aa18.24■□□□□ 0.51
ATG4B-209ENST00000425239 AACSQ86V21 672 aa18.24■□□□□ 0.51
ATG4B-209ENST00000425239 PANK1Q8TE04 598 aa18.24■□□□□ 0.51
ATG4B-209ENST00000425239 EDC3Q96F86 508 aaKnown RBP18.24■□□□□ 0.51
ATG4B-209ENST00000425239 APBA2Q99767 749 aa18.24■□□□□ 0.51
ATG4B-209ENST00000425239 SYN1P17600 705 aa18.23■□□□□ 0.51
ATG4B-209ENST00000425239 PTPREP23469 700 aa18.23■□□□□ 0.51
ATG4B-209ENST00000425239 MAGEA10P43363 369 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-209ENST00000425239 USP14P54578 494 aa18.23■□□□□ 0.51
ATG4B-209ENST00000425239 PDE3AQ14432 1141 aa18.23■□□□□ 0.51
ATG4B-209ENST00000425239 RAB3GAP1Q15042 981 aa18.23■□□□□ 0.51
ATG4B-209ENST00000425239 SIAH1Q8IUQ4 282 aa18.23■□□□□ 0.51
ATG4B-209ENST00000425239 SIRT2Q8IXJ6 389 aa18.23■□□□□ 0.51
ATG4B-209ENST00000425239 RHPN1Q8TCX5 695 aa18.23■□□□□ 0.51
ATG4B-209ENST00000425239 IL1RAPL2Q9NP60 686 aa18.23■□□□□ 0.51
ATG4B-209ENST00000425239 FRMPD3Q5JV73 1810 aa18.22■□□□□ 0.51
ATG4B-209ENST00000425239 SPDYE16A6NNV3 312 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-209ENST00000425239 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
ATG4B-209ENST00000425239 SEPT2Q15019 361 aa18.22■□□□□ 0.51
ATG4B-209ENST00000425239 LRRC26Q2I0M4 334 aa18.22■□□□□ 0.51
ATG4B-209ENST00000425239 LRIT3Q3SXY7 679 aa18.22■□□□□ 0.51
ATG4B-209ENST00000425239 KIAA1755Q5JYT7 1200 aa18.22■□□□□ 0.51
ATG4B-209ENST00000425239 GPR153Q6NV75 609 aa18.22■□□□□ 0.51
ATG4B-209ENST00000425239 ERC1Q8IUD2 1116 aa18.22■□□□□ 0.51
ATG4B-209ENST00000425239 EYSQ5T1H1 3165 aa18.22■□□□□ 0.51
ATG4B-209ENST00000425239 SLC15A5A6NIM6 579 aa18.21■□□□□ 0.51
ATG4B-209ENST00000425239 PDE6AP16499 860 aa18.21■□□□□ 0.51
ATG4B-209ENST00000425239 GRB14Q14449 540 aa18.21■□□□□ 0.51
ATG4B-209ENST00000425239 SLC9C2Q5TAH2 1124 aa18.21■□□□□ 0.51
ATG4B-209ENST00000425239 MIER1Q8N108 512 aa18.21■□□□□ 0.51
ATG4B-209ENST00000425239 NPLOC4Q8TAT6 608 aa18.21■□□□□ 0.51
ATG4B-209ENST00000425239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.21■□□□□ 0.51
ATG4B-209ENST00000425239 CDH23Q9H251 3354 aa18.21■□□□□ 0.5
ATG4B-209ENST00000425239 MAGEB6P1A0A0J9YX57 407 aa18.2■□□□□ 0.5
ATG4B-209ENST00000425239 TRPV1Q8NER1 839 aa18.2■□□□□ 0.5
ATG4B-209ENST00000425239 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-209ENST00000425239 DCP1AQ9NPI6 582 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-209ENST00000425239 ZNF532Q9HCE3 1301 aa18.2■□□□□ 0.5
ATG4B-209ENST00000425239 SMIM22K7EJ46 135 aa18.19■□□□□ 0.5
ATG4B-209ENST00000425239 CCNA1P78396 465 aa18.19■□□□□ 0.5
ATG4B-209ENST00000425239 TTF1Q15361 905 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-209ENST00000425239 CCAR1Q8IX12 1150 aaKnown RBP18.19■□□□□ 0.5
ATG4B-209ENST00000425239 SDR42E1Q8WUS8 393 aa18.19■□□□□ 0.5
ATG4B-209ENST00000425239 FEZ1Q99689 392 aa18.19■□□□□ 0.5
ATG4B-209ENST00000425239 CABP5Q9NP86 173 aa18.19■□□□□ 0.5
ATG4B-209ENST00000425239 NAV1Q8NEY1 1877 aa18.18■□□□□ 0.5
ATG4B-209ENST00000425239 VCANP13611 3396 aa18.18■□□□□ 0.5
ATG4B-209ENST00000425239 POLR3DP05423 398 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-209ENST00000425239 COG2Q14746 738 aa18.18■□□□□ 0.5
ATG4B-209ENST00000425239 SLFNL1Q499Z3 407 aa18.18■□□□□ 0.5
ATG4B-209ENST00000425239 TDHQ8IZJ6 230 aa18.18■□□□□ 0.5
ATG4B-209ENST00000425239 LCORLQ8N3X6 602 aa18.18■□□□□ 0.5
ATG4B-209ENST00000425239 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
ATG4B-209ENST00000425239 ZBTB40Q9NUA8 1239 aa18.18■□□□□ 0.5
ATG4B-209ENST00000425239 MCM9Q9NXL9 1143 aa18.18■□□□□ 0.5
ATG4B-209ENST00000425239 A0A0G2JMZ2 1700 aa18.18■□□□□ 0.5
ATG4B-209ENST00000425239 GLRX3O76003 335 aaKnown RBP18.17■□□□□ 0.5
ATG4B-209ENST00000425239 CYP2D6P10635 497 aa18.17■□□□□ 0.5
ATG4B-209ENST00000425239 CYP2C19P33261 490 aa18.17■□□□□ 0.5
ATG4B-209ENST00000425239 HSP90AB4PQ58FF6 505 aa18.17■□□□□ 0.5
ATG4B-209ENST00000425239 RPAP2Q8IXW5 612 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-209ENST00000425239 SLC44A5Q8NCS7 719 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms