RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TTF2Q9UNY4 1162 aaKnown RBP4.9□□□□□ -1.63
SF3B1-205ENST00000424674 TMEM265A0A087WTH1 108 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 SH3BP5O60239 455 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 PPFIA4O75335 1185 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 S100BP04271 92 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-205ENST00000424674 YBX3P16989 372 aaKnown RBP eCLIP4.89□□□□□ -1.638e-12■□□□□ 9.7
SF3B1-205ENST00000424674 ITIH2P19823 946 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 AOC3Q16853 763 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 PLEKHG6Q3KR16 790 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 TMEM87AQ8NBN3 555 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 SGSM3Q96HU1 749 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 FRMD6Q96NE9 622 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 IRF2BPLQ9H1B7 796 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 MRS2Q9HD23 443 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 GTF2IRD1Q9UHL9 959 aa4.89□□□□□ -1.63
SF3B1-205ENST00000424674 IGF2BP3O00425 579 aaKnown RBP eCLIP4.88□□□□□ -1.63
SF3B1-205ENST00000424674 BIN1O00499 593 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 PAPLNO95428 1278 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 EIF4BP23588 611 aaKnown RBP4.88□□□□□ -1.63
SF3B1-205ENST00000424674 GNA15P30679 374 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 DNAJA1P31689 397 aaKnown RBP4.88□□□□□ -1.63
SF3B1-205ENST00000424674 CD96P40200 585 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 ANGEL2Q5VTE6 544 aaKnown RBP4.88□□□□□ -1.63
SF3B1-205ENST00000424674 SV2BQ7L1I2 683 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 CDC37L1Q7L3B6 337 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 FILIP1Q7Z7B0 1213 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 JAZF1Q86VZ6 243 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 NME8Q8N427 588 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 PNISRQ8TF01 805 aaKnown RBP4.88□□□□□ -1.63
SF3B1-205ENST00000424674 GAL3ST3Q96A11 431 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 HEXIM2Q96MH2 286 aaKnown RBP4.88□□□□□ -1.63
SF3B1-205ENST00000424674 TNKS2Q9H2K2 1166 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 RC3H2Q9HBD1 1191 aaKnown RBP4.88□□□□□ -1.63
SF3B1-205ENST00000424674 PCDH12Q9NPG4 1184 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 GEMIN8Q9NWZ8 242 aaKnown RBP4.88□□□□□ -1.63
SF3B1-205ENST00000424674 PLAGL2Q9UPG8 496 aa4.88□□□□□ -1.63
SF3B1-205ENST00000424674 PRAMEF27A3QJZ7 478 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 BTBD11A6QL63 1104 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 DNAJC6O75061 913 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 PRPF40AO75400 957 aaKnown RBP4.87□□□□□ -1.63
SF3B1-205ENST00000424674 FANCCQ00597 558 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 XPCQ01831 940 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-205ENST00000424674 ARID5AQ03989 594 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 C4orf46Q504U0 113 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 ZFYVE27Q5T4F4 411 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 OGFOD2Q6N063 350 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 LRFN4Q6PJG9 635 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 ARMCX6Q7L4S7 300 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 MRFAP1L1Q96HT8 127 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 PARP2Q9UGN5 583 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 PRKAB1Q9Y478 270 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 SNX11Q9Y5W9 270 aa4.87□□□□□ -1.63
SF3B1-205ENST00000424674 GNAT3A8MTJ3 354 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 ENPP3O14638 875 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 PPP1R12AO14974 1030 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-205ENST00000424674 STK10O94804 968 aaKnown RBP4.86□□□□□ -1.63
SF3B1-205ENST00000424674 LRIG2O94898 1065 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 RNASE1P07998 156 aaKnown RBP4.86□□□□□ -1.63
SF3B1-205ENST00000424674 ZNF76P36508 570 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 TBX4P57082 545 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 PTPN11Q06124 597 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-205ENST00000424674 INPP5AQ14642 412 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 WIPI1Q5MNZ9 446 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-205ENST00000424674 LDLRAD1Q5T700 205 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 TTBK2Q6IQ55 1244 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 TSHZ1Q6ZSZ6 1077 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 FAM214BQ7L5A3 538 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 HDXQ7Z353 690 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 ATG4DQ86TL0 474 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-205ENST00000424674 SPACA3Q8IXA5 215 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 PI4K2BQ8TCG2 481 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 ZNF507Q8TCN5 953 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 PLPPR2Q96GM1 343 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 SPC25Q9HBM1 224 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 PRDM5Q9NQX1 630 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-205ENST00000424674 MBNL3Q9NUK0 354 aaKnown RBP4.86□□□□□ -1.63
SF3B1-205ENST00000424674 IFT57Q9NWB7 429 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 GABBR1Q9UBS5 961 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 ADAMTS6Q9UKP5 1117 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 MAPK8IP1Q9UQF2 711 aa4.86□□□□□ -1.63
SF3B1-205ENST00000424674 F6X3S4 739 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 PRC1O43663 620 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 EOMESO95936 686 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 LMNB1P20700 586 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 CLCN7P51798 805 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 BIRC2Q13490 618 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 BMS1Q14692 1282 aaKnown RBP4.85□□□□□ -1.63
SF3B1-205ENST00000424674 CCDC85BQ15834 202 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-205ENST00000424674 MAP3K11Q16584 847 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-205ENST00000424674 CYFIP1Q7L576 1253 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 POU5F2Q8N7G0 328 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 LRRN4CLQ8ND94 238 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 ASB11Q8WXH4 323 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 PKNOX2Q96KN3 472 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 FOXQ1Q9C009 403 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 WNT10AQ9GZT5 417 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 MAF1Q9H063 256 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 ACBD3Q9H3P7 528 aa4.85□□□□□ -1.63
SF3B1-205ENST00000424674 TYW1Q9NV66 732 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms