RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 FILIP1Q7Z7B0 1213 aa9.73□□□□□ -0.85
VPS8-204ENST00000424463 GIMAP1Q8WWP7 306 aa9.73□□□□□ -0.85
VPS8-204ENST00000424463 NEK1Q96PY6 1258 aa9.73□□□□□ -0.85
VPS8-204ENST00000424463 LRRC2Q9BYS8 371 aa9.73□□□□□ -0.85
VPS8-204ENST00000424463 PUS7LQ9H0K6 701 aaKnown RBP9.73□□□□□ -0.85
VPS8-204ENST00000424463 PIH1D3Q9NQM4 214 aaKnown RBP9.73□□□□□ -0.85
VPS8-204ENST00000424463 LMBRD1Q9NUN5 540 aa9.73□□□□□ -0.85
VPS8-204ENST00000424463 HMG20BQ9P0W2 317 aa9.73□□□□□ -0.85
VPS8-204ENST00000424463 USP25Q9UHP3 1055 aa9.73□□□□□ -0.85
VPS8-204ENST00000424463 CCNL1Q9UK58 526 aaPredicted RBP9.73□□□□□ -0.85
VPS8-204ENST00000424463 ZNF652Q9Y2D9 606 aa9.73□□□□□ -0.85
VPS8-204ENST00000424463 EP400Q96L91 3159 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 KRT38O76015 456 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 MYCLP1P12525 358 aaPredicted RBP9.72□□□□□ -0.85
VPS8-204ENST00000424463 STK3Q13188 491 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 PUM3Q15397 648 aaKnown RBP9.72□□□□□ -0.85
VPS8-204ENST00000424463 LEKR1Q6ZMV7 388 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 SEPT12Q8IYM1 358 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 TRIML1Q8N9V2 468 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.72□□□□□ -0.85
VPS8-204ENST00000424463 LCMT1Q9UIC8 334 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 MROH5Q6ZUA9 1318 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 ANKRD36CQ5JPF3 1778 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 CNTNAP4Q9C0A0 1308 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 FOXP2O15409 715 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 RPS6KA4O75676 772 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 NEBLO76041 1014 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 SNUPNO95149 360 aaKnown RBP9.72□□□□□ -0.85
VPS8-204ENST00000424463 GJA8P48165 433 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 SESN3P58005 492 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 SREK1Q8WXA9 508 aaKnown RBP9.72□□□□□ -0.85
VPS8-204ENST00000424463 LPIN2Q92539 896 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 NACC2Q96BF6 587 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 ZSCAN31Q96LW9 406 aaPredicted RBP9.72□□□□□ -0.85
VPS8-204ENST00000424463 IFT122Q9HBG6 1241 aa9.72□□□□□ -0.85
VPS8-204ENST00000424463 BARX2Q9UMQ3 279 aaPredicted RBP9.72□□□□□ -0.85
VPS8-204ENST00000424463 MYO1BO43795 1136 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 AP1G2O75843 785 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 SYT1P21579 422 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 GJB2P29033 226 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 IGHMBP2P38935 993 aaKnown RBP9.71□□□□□ -0.85
VPS8-204ENST00000424463 BCAMP50895 628 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 ZBED6P86452 979 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 RBBP5Q15291 538 aaKnown RBP9.71□□□□□ -0.85
VPS8-204ENST00000424463 SLC9C2Q5TAH2 1124 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 PLPP6Q8IY26 295 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 TRIM11Q96F44 468 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 PAGR1Q9BTK6 254 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 DSCC1Q9BVC3 393 aa9.71□□□□□ -0.85
VPS8-204ENST00000424463 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.71□□□□□ -0.85
VPS8-204ENST00000424463 IDH1O75874 414 aaKnown RBP9.71□□□□□ -0.86
VPS8-204ENST00000424463 SMC2O95347 1197 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 PYGLP06737 847 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 FOSL1P15407 271 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 CYP11B2P19099 503 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 TPP2P29144 1249 aaPredicted RBP9.71□□□□□ -0.86
VPS8-204ENST00000424463 CHRNDQ07001 517 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 KRT32Q14532 448 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 SKOR2Q2VWA4 1001 aaPredicted RBP9.71□□□□□ -0.86
VPS8-204ENST00000424463 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
VPS8-204ENST00000424463 Q6ZUG5 572 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 CCDC186Q7Z3E2 898 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 SCYL1Q96KG9 808 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 QTRT2Q9H974 415 aaKnown RBP9.71□□□□□ -0.86
VPS8-204ENST00000424463 SH2B1Q9NRF2 756 aaPredicted RBP9.71□□□□□ -0.86
VPS8-204ENST00000424463 RREB1Q92766 1687 aa9.71□□□□□ -0.86
VPS8-204ENST00000424463 LRRC10BA6NIK2 292 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 ZPR1O75312 459 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 MYL1P05976 194 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 PYGBP11216 843 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 SLC5A1P13866 664 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 HAND2P61296 217 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 RASSF7Q02833 373 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 CHST3Q7LGC8 479 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 SRLQ86TD4 932 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 GAS2L3Q86XJ1 694 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 ZNF512BQ96KM6 892 aaPredicted RBP9.7□□□□□ -0.86
VPS8-204ENST00000424463 RMDN2Q96LZ7 410 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.7□□□□□ -0.86
VPS8-204ENST00000424463 NARFQ9UHQ1 456 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 COL4A1P02462 1669 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 E7EWF7 191 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 ONECUT3O60422 494 aaPredicted RBP9.7□□□□□ -0.86
VPS8-204ENST00000424463 FGAP02671 866 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 ZFYP08048 801 aaPredicted RBP9.7□□□□□ -0.86
VPS8-204ENST00000424463 RASGRF1Q13972 1273 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS8-204ENST00000424463 TMEM110Q86TL2 294 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 KRT222Q8N1A0 295 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 STAG1Q8WVM7 1258 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 APPBP2Q92624 585 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 RBM17Q96I25 401 aaKnown RBP9.7□□□□□ -0.86
VPS8-204ENST00000424463 SETDB2Q96T68 719 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 ALDH8A1Q9H2A2 487 aaPredicted RBP9.7□□□□□ -0.86
VPS8-204ENST00000424463 GDPD2Q9HCC8 539 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 LRRC4BQ9NT99 713 aa9.7□□□□□ -0.86
VPS8-204ENST00000424463 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
VPS8-204ENST00000424463 RTCBQ9Y3I0 505 aaKnown RBP9.7□□□□□ -0.86
VPS8-204ENST00000424463 WDR33Q9C0J8 1336 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms