RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 IL25Q9H293 177 aa13.05□□□□□ -0.32
TOP3B-203ENST00000424393 USP17L10C9JJH3 530 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 MPHOSPH10O00566 681 aaKnown RBP13.04□□□□□ -0.32
TOP3B-203ENST00000424393 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
TOP3B-203ENST00000424393 BACE1P56817 501 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 PPARAQ07869 468 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 ALX1Q15699 326 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 TREML2Q5T2D2 321 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 ACER1Q8TDN7 264 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 CCDC17Q96LX7 622 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 ZFYVE28Q9HCC9 887 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 AGTPBP1Q9UPW5 1226 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 ADGRA2Q96PE1 1338 aa13.04□□□□□ -0.32
TOP3B-203ENST00000424393 C19orf81C9J6K1 198 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 TLR2O60603 784 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 FKTNO75072 461 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 FGAP02671 866 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 RASA1P20936 1047 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 CHMLP26374 656 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 ERICH6BQ5W0A0 696 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 CLEC10AQ8IUN9 316 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 SLC45A1Q9Y2W3 748 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 TACC3Q9Y6A5 838 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 ZMYM6O95789 1325 aa13.03□□□□□ -0.32
TOP3B-203ENST00000424393 ZSWIM8A7E2V4 1837 aa13.02□□□□□ -0.32
TOP3B-203ENST00000424393 LAMA4Q16363 1823 aa13.02□□□□□ -0.32
TOP3B-203ENST00000424393 A0A1W2PRG0 241 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 PRDM1O75626 825 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 CYP2C8P10632 490 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.33
TOP3B-203ENST00000424393 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 SIAH1Q8IUQ4 282 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.02□□□□□ -0.33
TOP3B-203ENST00000424393 MKNK2Q9HBH9 465 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 EMILIN3Q9NT22 766 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 PPP4R2Q9NY27 417 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 ANAPC4Q9UJX5 808 aa13.02□□□□□ -0.33
TOP3B-203ENST00000424393 CAP1Q01518 475 aa13.01□□□□□ -0.33
TOP3B-203ENST00000424393 ZYXQ15942 572 aaKnown RBP13.01□□□□□ -0.33
TOP3B-203ENST00000424393 C17orf99Q6UX52 265 aa13.01□□□□□ -0.33
TOP3B-203ENST00000424393 C12orf42Q96LP6 360 aa13.01□□□□□ -0.33
TOP3B-203ENST00000424393 PARK7Q99497 189 aaKnown RBP13.01□□□□□ -0.33
TOP3B-203ENST00000424393 FEZ1Q99689 392 aa13.01□□□□□ -0.33
TOP3B-203ENST00000424393 KIAA1683Q9H0B3 1180 aa13.01□□□□□ -0.33
TOP3B-203ENST00000424393 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
TOP3B-203ENST00000424393 TMOD4Q9NZQ9 345 aa13.01□□□□□ -0.33
TOP3B-203ENST00000424393 CPA4Q9UI42 421 aa13.01□□□□□ -0.33
TOP3B-203ENST00000424393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
TOP3B-203ENST00000424393 RAD50Q92878 1312 aa13.01□□□□□ -0.33
TOP3B-203ENST00000424393 SP3Q02447 781 aa13□□□□□ -0.33
TOP3B-203ENST00000424393 ICA1Q05084 483 aa13□□□□□ -0.33
TOP3B-203ENST00000424393 PDE4BQ07343 736 aa13□□□□□ -0.33
TOP3B-203ENST00000424393 BMP2KLQ5H9B9 411 aa13□□□□□ -0.33
TOP3B-203ENST00000424393 DSCC1Q9BVC3 393 aa13□□□□□ -0.33
TOP3B-203ENST00000424393 ZNF287Q9HBT7 754 aa13□□□□□ -0.33
TOP3B-203ENST00000424393 PLIN4Q96Q06 1357 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 IGKV6D-41A0A0C4DH26 115 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 SLC3A2P08195 630 aaKnown RBP12.99□□□□□ -0.33
TOP3B-203ENST00000424393 FGRP09769 529 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 BCRP11274 1271 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 EEF2P13639 858 aaKnown RBP12.99□□□□□ -0.33
TOP3B-203ENST00000424393 HOXA7P31268 230 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-203ENST00000424393 USP14P54578 494 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 HAND2P61296 217 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 PABPC4Q13310 644 aaKnown RBP eCLIP12.99□□□□□ -0.33
TOP3B-203ENST00000424393 KIAA1755Q5JYT7 1200 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 FBXO46Q6PJ61 603 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-203ENST00000424393 ZNF444Q8N0Y2 327 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-203ENST00000424393 CD99L2Q8TCZ2 262 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 NBPF3Q9H094 633 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 ASCC2Q9H1I8 757 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-203ENST00000424393 KANSL2Q9H9L4 492 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 PNMA3Q9UL41 463 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 TMX2Q9Y320 296 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 MYH4Q9Y623 1939 aa12.99□□□□□ -0.33
TOP3B-203ENST00000424393 SGSM2O43147 1006 aa12.98□□□□□ -0.33
TOP3B-203ENST00000424393 VCAM1P19320 739 aa12.98□□□□□ -0.33
TOP3B-203ENST00000424393 FAM47AQ5JRC9 791 aa12.98□□□□□ -0.33
TOP3B-203ENST00000424393 NEDD1Q8NHV4 660 aa12.98□□□□□ -0.33
TOP3B-203ENST00000424393 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
TOP3B-203ENST00000424393 ERO1AQ96HE7 468 aa12.98□□□□□ -0.33
TOP3B-203ENST00000424393 MGAMO43451 1857 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 PARP14Q460N5 1801 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 ORC4O43929 436 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 OSBPP22059 807 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 CTGFP29279 349 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 TFAP4Q01664 338 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 PTH1RQ03431 593 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 SMCR8Q8TEV9 937 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-203ENST00000424393 CEP95Q96GE4 821 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 P2RX7Q99572 595 aaKnown RBP12.97□□□□□ -0.33
TOP3B-203ENST00000424393 ARHGAP39Q9C0H5 1083 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 VCPKMTQ9H867 229 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 NYAP2Q9P242 653 aa12.97□□□□□ -0.33
TOP3B-203ENST00000424393 RLFQ13129 1914 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms