RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 SND1Q7KZF4 910 aaKnown RBP eCLIP15.39■□□□□ 0.054e-9■□□□□ 11
SREBF2-202ENST00000424354 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.39■□□□□ 0.05
SREBF2-202ENST00000424354 SETDB2Q96T68 719 aa15.39■□□□□ 0.05
SREBF2-202ENST00000424354 EFCAB8A8MWE9 144 aa15.39■□□□□ 0.05
SREBF2-202ENST00000424354 MAP2K2P36507 400 aa15.39■□□□□ 0.05
SREBF2-202ENST00000424354 WWC3Q9ULE0 1092 aa15.39■□□□□ 0.05
SREBF2-202ENST00000424354 MTX1Q13505 466 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 ERCC6LQ2NKX8 1250 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 PLIN2Q99541 437 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 VSIG1Q86XK7 387 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 SYCE1Q8N0S2 351 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 MAGEA1P43355 309 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 CDC37L1Q7L3B6 337 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 CCDC125Q86Z20 511 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 NUCKS1Q9H1E3 243 aaKnown RBP15.38■□□□□ 0.05
SREBF2-202ENST00000424354 STK32BQ9NY57 414 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 FAM184BQ9ULE4 1060 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 AFF2P51816 1311 aa15.38■□□□□ 0.05
SREBF2-202ENST00000424354 PPP2R5BQ15173 497 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 FAM173BQ6P4H8 233 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 ZNF804AQ7Z570 1209 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 MCM9Q9NXL9 1143 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 ZNF365Q70YC5 407 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 MCUR1Q96AQ8 359 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 XPO4Q9C0E2 1151 aaKnown RBP15.37■□□□□ 0.05
SREBF2-202ENST00000424354 GOLGA8KD6RF30 607 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 IQSEC3Q9UPP2 1182 aaPredicted RBP15.37■□□□□ 0.05
SREBF2-202ENST00000424354 CALUO43852 315 aaPredicted RBP15.37■□□□□ 0.05
SREBF2-202ENST00000424354 SLC39A6Q13433 755 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 CCDC38Q502W7 563 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
SREBF2-202ENST00000424354 DIS3L2Q8IYB7 885 aaKnown RBP15.37■□□□□ 0.05
SREBF2-202ENST00000424354 SIGLEC1Q9BZZ2 1709 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 ADGRB2O60241 1585 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 CCDC62Q6P9F0 684 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 DCAF5Q96JK2 942 aa15.37■□□□□ 0.05
SREBF2-202ENST00000424354 ARL1P40616 181 aaPredicted RBP15.36■□□□□ 0.05
SREBF2-202ENST00000424354 VPS72Q15906 364 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 TNNI3KQ59H18 835 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 GKAP1Q5VSY0 366 aaPredicted RBP15.36■□□□□ 0.05
SREBF2-202ENST00000424354 CCDC84Q86UT8 332 aaPredicted RBP15.36■□□□□ 0.05
SREBF2-202ENST00000424354 FPGT-TNNI3KV9GXZ4 949 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 E7EVH7 732 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 CETN3O15182 167 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 PARP1P09874 1014 aaKnown RBP15.36■□□□□ 0.05
SREBF2-202ENST00000424354 MRFAP1L1Q96HT8 127 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 SAR1BQ9Y6B6 198 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 MAP3K19Q56UN5 1328 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 TTC38Q5R3I4 469 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 MIGA1Q8NAN2 632 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 MAK16Q9BXY0 300 aaKnown RBP15.36■□□□□ 0.05
SREBF2-202ENST00000424354 TFCP2L1Q9NZI6 479 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 WDR17Q8IZU2 1322 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 HOXB7P09629 217 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 LETM2Q2VYF4 491 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 PHLDB2Q86SQ0 1253 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 STK24Q9Y6E0 443 aa15.36■□□□□ 0.05
SREBF2-202ENST00000424354 PSMD1Q99460 953 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 PPP1R12CQ9BZL4 782 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 MED4Q9NPJ6 270 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 TAB2Q9NYJ8 693 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 CEP104O60308 925 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 GOLGA5Q8TBA6 731 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 SLF1Q9BQI6 1058 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 TCHPQ9BT92 498 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 B4E1Z4 1266 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 MBD4O95243 580 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 APPBP2Q92624 585 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 NLRP3Q96P20 1036 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 PARP2Q9UGN5 583 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 RPS6KA1Q15418 735 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 ADALQ6DHV7 355 aa15.35■□□□□ 0.05
SREBF2-202ENST00000424354 NCOA5Q9HCD5 579 aaKnown RBP15.35■□□□□ 0.05
SREBF2-202ENST00000424354 RASSF2P50749 326 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 HAUS3Q68CZ6 603 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 ARHGEF2Q92974 986 aaKnown RBP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 DDX21Q9NR30 783 aaKnown RBP eCLIP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 CASQ2O14958 399 aaPredicted RBP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 CLGNO14967 610 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 GMNNO75496 209 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 ARID4AP29374 1257 aaPredicted RBP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 RPUSD2Q8IZ73 545 aaKnown RBP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 ATP8B1O43520 1251 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 FLOT1O75955 427 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 ZNF131P52739 623 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 SMC1BQ8NDV3 1235 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 RAB17Q9H0T7 212 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 PARP3Q9Y6F1 533 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 MRPL12P52815 198 aaKnown RBP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 SH3BGRP55822 239 aaPredicted RBP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 ETF1P62495 437 aaKnown RBP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 LIN9Q5TKA1 542 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 PIK3AP1Q6ZUJ8 805 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 RNF10Q8N5U6 811 aaKnown RBP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 UAP1Q16222 522 aaPredicted RBP15.34■□□□□ 0.05
SREBF2-202ENST00000424354 WDR44Q5JSH3 913 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 HHATQ5VTY9 493 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 KLHL7Q8IXQ5 586 aa15.34■□□□□ 0.05
SREBF2-202ENST00000424354 OGFOD1Q8N543 542 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms