RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	FGR	P09769	529 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	FDPS	P14324	419 aa	Known RBP	11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	MMP14	P50281	582 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	GSTO1	P78417	241 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	PPARA	Q07869	468 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	APOA5	Q6Q788	366 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	NFXL1	Q6ZNB6	911 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	CYB5R4	Q7L1T6	521 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	ZNF804A	Q7Z570	1209 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	FBXO18	Q8NFZ0	1043 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	ESR2	Q92731	530 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	FBXW7	Q969H0	707 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	NSUN4	Q96CB9	384 aa	Known RBP	11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	C8orf76	Q96K31	380 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	GML	Q99445	158 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	LY9	Q9HBG7	655 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	NCOA5	Q9HCD5	579 aa	Known RBP	11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	ZSWIM5	Q9P217	1185 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	ORC3	Q9UBD5	711 aa	Predicted RBP	11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	COLQ	Q9Y215	455 aa	Predicted RBP	11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	SLC12A7	Q9Y666	1083 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	NEDD4	P46934	1319 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	STK36	Q9NRP7	1315 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	IRS2	Q9Y4H2	1338 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	PRKAB2	O43741	272 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	KDM4A	O75164	1064 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	LDHC	P07864	332 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	INHBE	P58166	350 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	HS1BP3	Q53T59	392 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	PRAMEF18	Q5VWM3	479 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	FAM43A	Q8N2R8	423 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	MIGA1	Q8NAN2	632 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	TDRD7	Q8NHU6	1098 aa	Known RBP	11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	PANK2	Q9BZ23	570 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	RBSN	Q9H1K0	784 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	SCAF8	Q9UPN6	1271 aa	Known RBP	11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	TRIM17	Q9Y577	477 aa		11.65	□□□□□ -0.54
POLR1A-204	ENST00000424089	MANSC4	A6NHS7	340 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	ADD1	P35611	737 aa	Known RBP	11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	MECOM	Q03112	1051 aa		11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	CTDSPL2	Q05D32	466 aa		11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	WTAP	Q15007	396 aa		11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	NBPF9	Q3BBW0	867 aa		11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	SBK1	Q52WX2	424 aa		11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	POTED	Q86YR6	584 aa		11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	TRIM44	Q96DX7	344 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	GPHN	Q9NQX3	736 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	RTEL1	Q9NZ71	1219 aa		11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	LAMA4	Q16363	1823 aa		11.64	□□□□□ -0.55
POLR1A-204	ENST00000424089	COL1A1	P02452	1464 aa	Predicted RBP	11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	GOLGA8A	A7E2F4	631 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	WNT10B	O00744	389 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	CTAGE5	O15320	804 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	YEATS4	O95619	227 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	CAVIN2	O95810	425 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	CALM1	P0DP23	149 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	CALM2	P0DP24	149 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	CALM3	P0DP25	149 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	IFNAR1	P17181	557 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	PRKG1	Q13976	671 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	TRIM29	Q14134	588 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	ADGRA1	Q86SQ6	560 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	ERO1A	Q96HE7	468 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	UBAC1	Q9BSL1	405 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	NUP62CL	Q9H1M0	184 aa		11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	TFIP11	Q9UBB9	837 aa	Known RBP	11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.63	□□□□□ -0.55
POLR1A-204	ENST00000424089	ORC4	O43929	436 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	FMNL1	O95466	1100 aa	Predicted RBP	11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	BAG3	O95817	575 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	LDHB	P07195	334 aa	Known RBP	11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	CCDC192	P0DO97	292 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	PPP4C	P60510	307 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	SSRP1	Q08945	709 aa	Known RBP	11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	NTRK3	Q16288	839 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	MAP3K11	Q16584	847 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	CCDC178	Q5BJE1	867 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	DACT2	Q5SW24	774 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	STRIP1	Q5VSL9	837 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	SPRYD7	Q5W111	196 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	OTUD7B	Q6GQQ9	843 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	RBM43	Q6ZSC3	357 aa	Known RBP	11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	IQCA1	Q86XH1	822 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	DZIP1	Q86YF9	867 aa	Known RBP	11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	SLF2	Q8IX21	1173 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	TRIM22	Q8IYM9	498 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	KCNG4	Q8TDN1	519 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	SLC10A4	Q96EP9	437 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	COA1	Q9GZY4	146 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	TOMM22	Q9NS69	142 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089	POLR3E	Q9NVU0	708 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089		A0A1B0GUL6	1792 aa		11.62	□□□□□ -0.55
POLR1A-204	ENST00000424089		A0A1W2PQ27	194 aa		11.61	□□□□□ -0.55
POLR1A-204	ENST00000424089		A0A1W2PQ64	194 aa		11.61	□□□□□ -0.55
POLR1A-204	ENST00000424089		A0A1W2PQD8	194 aa		11.61	□□□□□ -0.55
POLR1A-204	ENST00000424089	MINDY4B	A8MYZ0	360 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms