RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 CCL15-CCL14A0A0B4J2E2 113 aa22.26■■□□□ 1.15
MCF2L-214ENST00000423251 CCL15Q16663 113 aa22.26■■□□□ 1.15
MCF2L-214ENST00000423251 SHROOM1Q2M3G4 852 aaPredicted RBP22.26■■□□□ 1.15
MCF2L-214ENST00000423251 TMEM179Q6ZVK1 233 aa22.26■■□□□ 1.15
MCF2L-214ENST00000423251 ZNF444Q8N0Y2 327 aaPredicted RBP22.26■■□□□ 1.15
MCF2L-214ENST00000423251 CENPFP49454 3210 aa22.26■■□□□ 1.15
MCF2L-214ENST00000423251 RASA1P20936 1047 aa22.25■■□□□ 1.15
MCF2L-214ENST00000423251 GUCY1A2P33402 732 aa22.25■■□□□ 1.15
MCF2L-214ENST00000423251 SP3Q02447 781 aa22.25■■□□□ 1.15
MCF2L-214ENST00000423251 SPP2Q13103 211 aa22.25■■□□□ 1.15
MCF2L-214ENST00000423251 CCDC84Q86UT8 332 aaPredicted RBP22.25■■□□□ 1.15
MCF2L-214ENST00000423251 STK11IPQ8N1F8 1099 aa22.25■■□□□ 1.15
MCF2L-214ENST00000423251 EFCC1Q9HA90 598 aa22.25■■□□□ 1.15
MCF2L-214ENST00000423251 PTPN22Q9Y2R2 807 aa22.25■■□□□ 1.15
MCF2L-214ENST00000423251 ZSWIM8A7E2V4 1837 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 A0A0G2JLL6 359 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-214ENST00000423251 POTEFA5A3E0 1075 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 MPHOSPH10O00566 681 aaKnown RBP22.24■■□□□ 1.15
MCF2L-214ENST00000423251 ZNF213O14771 459 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 FGRP09769 529 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 PCP11498 1178 aaKnown RBP22.24■■□□□ 1.15
MCF2L-214ENST00000423251 AKR1B1P15121 316 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 CTDSPL2Q05D32 466 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 RAB3GAP1Q15042 981 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 TAF1CQ15572 869 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-214ENST00000423251 KIAA1211Q6ZU35 1233 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 PRRT2Q7Z6L0 340 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-214ENST00000423251 FAM43AQ8N2R8 423 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 ATAD5Q96QE3 1844 aa22.24■■□□□ 1.15
MCF2L-214ENST00000423251 TRIM75PA6NK02 468 aa22.23■■□□□ 1.15
MCF2L-214ENST00000423251 PTH1RQ03431 593 aa22.23■■□□□ 1.15
MCF2L-214ENST00000423251 SEPT2Q15019 361 aa22.23■■□□□ 1.15
MCF2L-214ENST00000423251 FASTKD5Q7L8L6 764 aaKnown RBP22.23■■□□□ 1.15
MCF2L-214ENST00000423251 MAP4K1Q92918 833 aa22.23■■□□□ 1.15
MCF2L-214ENST00000423251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.23■■□□□ 1.15
MCF2L-214ENST00000423251 PHIPQ8WWQ0 1821 aa22.22■■□□□ 1.15
MCF2L-214ENST00000423251 C19orf81C9J6K1 198 aa22.22■■□□□ 1.15
MCF2L-214ENST00000423251 PRDM1O75626 825 aa22.22■■□□□ 1.15
MCF2L-214ENST00000423251 BACE1P56817 501 aa22.22■■□□□ 1.15
MCF2L-214ENST00000423251 IMMTQ16891 758 aaKnown RBP22.22■■□□□ 1.15
MCF2L-214ENST00000423251 KANSL2Q9H9L4 492 aa22.22■■□□□ 1.15
MCF2L-214ENST00000423251 ZCCHC17Q9NP64 241 aaKnown RBP22.22■■□□□ 1.15
MCF2L-214ENST00000423251 U3KPZ7 1027 aaPredicted RBP22.22■■□□□ 1.15
MCF2L-214ENST00000423251 KIAA0100Q14667 2235 aaKnown RBP22.22■■□□□ 1.15
MCF2L-214ENST00000423251 USP17L10C9JJH3 530 aa22.21■■□□□ 1.15
MCF2L-214ENST00000423251 ORC4O43929 436 aa22.21■■□□□ 1.15
MCF2L-214ENST00000423251 HAND2P61296 217 aa22.21■■□□□ 1.15
MCF2L-214ENST00000423251 MOGSQ13724 837 aa22.21■■□□□ 1.15
MCF2L-214ENST00000423251 SH3D19Q5HYK7 790 aa22.21■■□□□ 1.15
MCF2L-214ENST00000423251 AKNAD1Q5T1N1 836 aa22.21■■□□□ 1.15
MCF2L-214ENST00000423251 RNF41Q9H4P4 317 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-214ENST00000423251 MKI67P46013 3256 aaKnown RBP22.2■■□□□ 1.14
MCF2L-214ENST00000423251 MFSD6Q6ZSS7 791 aa22.2■■□□□ 1.14
MCF2L-214ENST00000423251 NEDD1Q8NHV4 660 aa22.2■■□□□ 1.14
MCF2L-214ENST00000423251 STAG1Q8WVM7 1258 aa22.2■■□□□ 1.14
MCF2L-214ENST00000423251 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.2■■□□□ 1.14
MCF2L-214ENST00000423251 LSG1Q9H089 658 aaKnown RBP22.2■■□□□ 1.14
MCF2L-214ENST00000423251 NBPF3Q9H094 633 aa22.2■■□□□ 1.14
MCF2L-214ENST00000423251 ZFYVE28Q9HCC9 887 aa22.2■■□□□ 1.14
MCF2L-214ENST00000423251 INCENPQ9NQS7 918 aa22.2■■□□□ 1.14
MCF2L-214ENST00000423251 TACC3Q9Y6A5 838 aa22.2■■□□□ 1.14
MCF2L-214ENST00000423251 BRCA2P51587 3418 aa22.2■■□□□ 1.14
MCF2L-214ENST00000423251 MYH8P13535 1937 aa22.19■■□□□ 1.14
MCF2L-214ENST00000423251 BTBD19C9JJ37 291 aa22.19■■□□□ 1.14
MCF2L-214ENST00000423251 NT5C2P49902 561 aa22.19■■□□□ 1.14
MCF2L-214ENST00000423251 TFAP4Q01664 338 aa22.19■■□□□ 1.14
MCF2L-214ENST00000423251 ANKRD23Q86SG2 305 aa22.19■■□□□ 1.14
MCF2L-214ENST00000423251 SIAH1Q8IUQ4 282 aa22.19■■□□□ 1.14
MCF2L-214ENST00000423251 PROCA1Q8NCQ7 364 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-214ENST00000423251 ARMC5Q96C12 935 aa22.19■■□□□ 1.14
MCF2L-214ENST00000423251 KIAA1683Q9H0B3 1180 aa22.19■■□□□ 1.14
MCF2L-214ENST00000423251 TSPY3P0CV98 308 aa22.18■■□□□ 1.14
MCF2L-214ENST00000423251 TSPY8P0CW00 308 aa22.18■■□□□ 1.14
MCF2L-214ENST00000423251 USP14P54578 494 aa22.18■■□□□ 1.14
MCF2L-214ENST00000423251 MTMR2Q13614 643 aa22.18■■□□□ 1.14
MCF2L-214ENST00000423251 GPAT2Q6NUI2 795 aa22.18■■□□□ 1.14
MCF2L-214ENST00000423251 USP17L2Q6R6M4 530 aa22.18■■□□□ 1.14
MCF2L-214ENST00000423251 TBC1D10CQ8IV04 446 aa22.18■■□□□ 1.14
MCF2L-214ENST00000423251 ACER1Q8TDN7 264 aa22.18■■□□□ 1.14
MCF2L-214ENST00000423251 IGKV6D-41A0A0C4DH26 115 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 HMGCS2P54868 508 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 ICA1Q05084 483 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 FAM47AQ5JRC9 791 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 GADL1Q6ZQY3 521 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 ARHGEF10LQ9HCE6 1279 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 ANO2Q9NQ90 1003 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 TMOD4Q9NZQ9 345 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 SLC45A1Q9Y2W3 748 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 GTF3C3Q9Y5Q9 886 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 PTCH2Q9Y6C5 1203 aa22.17■■□□□ 1.14
MCF2L-214ENST00000423251 PLIN4Q96Q06 1357 aa22.16■■□□□ 1.14
MCF2L-214ENST00000423251 A0A1W2PRG0 241 aa22.16■■□□□ 1.14
MCF2L-214ENST00000423251 TSPY2A6NKD2 308 aa22.16■■□□□ 1.14
MCF2L-214ENST00000423251 RANBP6O60518 1105 aaKnown RBP22.16■■□□□ 1.14
MCF2L-214ENST00000423251 FEZ1Q99689 392 aa22.16■■□□□ 1.14
MCF2L-214ENST00000423251 SH2D4AQ9H788 454 aa22.16■■□□□ 1.14
MCF2L-214ENST00000423251 TOMM22Q9NS69 142 aa22.16■■□□□ 1.14
MCF2L-214ENST00000423251 EMILIN3Q9NT22 766 aa22.16■■□□□ 1.14
MCF2L-214ENST00000423251 NYAP2Q9P242 653 aa22.16■■□□□ 1.14
MCF2L-214ENST00000423251 AGTPBP1Q9UPW5 1226 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms