RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 BMP4P12644 408 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 CTBSQ01459 385 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 LAMC2Q13753 1193 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 GRM2Q14416 872 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 ZNF394Q53GI3 561 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 TRAPPC3LQ5T215 181 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 COL13A1Q5TAT6 717 aaPredicted RBP6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 NXPE4Q6UWF7 544 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 SLCO4C1Q6ZQN7 724 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 ARHGAP27Q6ZUM4 889 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 HS2ST1Q7LGA3 356 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 ERMP1Q7Z2K6 904 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 ZNF654Q8IZM8 581 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 GOLGA6L1Q8N7Z2 621 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 AVENQ9NQS1 362 aaPredicted RBP6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 POLKQ9UBT6 870 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 C4AP0C0L4 1744 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 BRCA1P38398 1863 aaKnown RBP6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 HOXD8P13378 290 aaPredicted RBP6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 TNNI2P48788 182 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 PEAR1Q5VY43 1037 aaPredicted RBP6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 PRPF40BQ6NWY9 871 aaKnown RBP6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 KANK3Q6NY19 840 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 USP48Q86UV5 1035 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 OR13H1Q8NG92 308 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 ARMC5Q96C12 935 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 GSX2Q9BZM3 304 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 CAPN10Q9HC96 672 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 KCNH4Q9UQ05 1017 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 WDR90Q96KV7 1748 aa6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 KDM6AO15550 1401 aaPredicted RBP6.33□□□□□ -1.4
CDC42EP3-202ENST00000422687 KDM2BQ8NHM5 1336 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 A0A1W2PP55 124 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 DCDC2BA2VCK2 349 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 CYP2E1P05181 493 aaPredicted RBP6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 CES1P23141 567 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 TM4SF1P30408 202 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 HTRA3P83110 453 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 RASSF7Q02833 373 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 DDR1Q08345 913 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 EIF4A2Q14240 407 aaKnown RBP6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 C1orf229Q6ZS94 237 aaPredicted RBP6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 TANGO6Q9C0B7 1094 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 PIM2Q9P1W9 311 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 GGT7Q9UJ14 662 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 SALL4Q9UJQ4 1053 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 PCDHGB7Q9Y5F8 929 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 KIF20BQ96Q89 1820 aa6.32□□□□□ -1.4
CDC42EP3-202ENST00000422687 N4BP2Q86UW6 1770 aaPredicted RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 USP42Q9H9J4 1324 aaKnown RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 KCPQ6ZWJ8 1503 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 COL5A3P25940 1745 aaPredicted RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 MMP20O60882 483 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 GADD45BO75293 160 aaPredicted RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 KIF4AO95239 1232 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 HSP90AB1P08238 724 aaKnown RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 EDN3P14138 238 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 GSTT1P30711 240 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 RFC4P35249 363 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 GJA8P48165 433 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 PRELPP51888 382 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 SFSWAPQ12872 951 aaKnown RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 GNL2Q13823 731 aaKnown RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 CCINQ13939 588 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 DALRD3Q5D0E6 543 aaKnown RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 TTC39BQ5VTQ0 682 aaPredicted RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 NOC4LQ9BVI4 516 aaKnown RBP6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 EFCC1Q9HA90 598 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 ZFATQ9P243 1243 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 PRKAG2Q9UGJ0 569 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 ARFGEF1Q9Y6D6 1849 aa6.31□□□□□ -1.4
CDC42EP3-202ENST00000422687 SHISA8B8ZZ34 492 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 POLRMTO00411 1230 aaKnown RBP6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 KHNYNO15037 678 aaKnown RBP6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 SASH3O75995 380 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 MAP3K6O95382 1288 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 SOX18P35713 384 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 CRKLP46109 303 aaKnown RBP6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 INTS5Q6P9B9 1019 aaKnown RBP6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 C16orf71Q8IYS4 520 aaPredicted RBP6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 TMEM151AQ8N4L1 468 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 SMC1BQ8NDV3 1235 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 NEDD1Q8NHV4 660 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 EDARADDQ8WWZ3 215 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 RRAGCQ9HB90 399 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 ABCB6Q9NP58 842 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 LATS2Q9NRM7 1088 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 MARK1Q9P0L2 795 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 RNF181Q9P0P0 153 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 GGA1Q9UJY5 639 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 PPM1HQ9ULR3 514 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 ADAMTS7Q9UKP4 1686 aa6.3□□□□□ -1.4
CDC42EP3-202ENST00000422687 MYH14Q7Z406 1995 aaKnown RBP6.29□□□□□ -1.4
CDC42EP3-202ENST00000422687 PHF20L1A8MW92 1017 aa6.29□□□□□ -1.4
CDC42EP3-202ENST00000422687 PPM1GO15355 546 aaPredicted RBP6.29□□□□□ -1.4
CDC42EP3-202ENST00000422687 EPXP11678 715 aa6.29□□□□□ -1.4
CDC42EP3-202ENST00000422687 CD33P20138 364 aa6.29□□□□□ -1.4
CDC42EP3-202ENST00000422687 TARSP26639 723 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms