RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 FOXP1Q9H334 677 aaPredicted RBP21.84■■□□□ 1.09
RBFOX1-204ENST00000422070 DDX4Q9NQI0 724 aaKnown RBP21.84■■□□□ 1.09
RBFOX1-204ENST00000422070 DDX19AQ9NUU7 478 aaKnown RBP21.84■■□□□ 1.09
RBFOX1-204ENST00000422070 LINC00301Q8NCQ3 95 aa21.83■■□□□ 1.09
RBFOX1-204ENST00000422070 PNMA1Q8ND90 353 aa21.83■■□□□ 1.09
RBFOX1-204ENST00000422070 IDI2Q9BXS1 227 aa21.83■■□□□ 1.09
RBFOX1-204ENST00000422070 MTFR1LQ9H019 292 aa21.83■■□□□ 1.09
RBFOX1-204ENST00000422070 EHD4Q9H223 541 aa21.83■■□□□ 1.09
RBFOX1-204ENST00000422070 MYH6P13533 1939 aa21.83■■□□□ 1.08
RBFOX1-204ENST00000422070 PLEKHA8P1O95397 391 aa21.82■■□□□ 1.08
RBFOX1-204ENST00000422070 GNAQP50148 359 aa21.82■■□□□ 1.08
RBFOX1-204ENST00000422070 GRM4Q14833 912 aa21.82■■□□□ 1.08
RBFOX1-204ENST00000422070 PKN1Q16512 942 aa21.82■■□□□ 1.08
RBFOX1-204ENST00000422070 KIAA0825Q8IV33 1275 aa21.82■■□□□ 1.08
RBFOX1-204ENST00000422070 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.82■■□□□ 1.08
RBFOX1-204ENST00000422070 UBE2Q2LH0YL09 131 aa21.82■■□□□ 1.08
RBFOX1-204ENST00000422070 FTOQ9C0B1 505 aaKnown RBP eCLIP21.82■■□□□ 1.08
RBFOX1-204ENST00000422070 SERPINB13Q9UIV8 391 aa21.82■■□□□ 1.08
RBFOX1-204ENST00000422070 A0A1W2PQ27 194 aa21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 A0A1W2PQ64 194 aa21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 A0A1W2PQD8 194 aa21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 YDJCA8MPS7 323 aa21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 LIG1P18858 919 aa21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 PICALMQ13492 652 aa21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 GNL2Q13823 731 aaKnown RBP21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 ANO1Q5XXA6 986 aa21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 NOSTRINQ8IVI9 506 aa21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 CMTR1Q8N1G2 835 aaKnown RBP21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 BICD2Q8TD16 824 aa21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 DHX36Q9H2U1 1008 aaKnown RBP21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 COL2A1P02458 1487 aaPredicted RBP21.81■■□□□ 1.08
RBFOX1-204ENST00000422070 HLA-DOAP06340 250 aa21.8■■□□□ 1.08
RBFOX1-204ENST00000422070 POLD1P28340 1107 aa21.8■■□□□ 1.08
RBFOX1-204ENST00000422070 ADALQ6DHV7 355 aa21.8■■□□□ 1.08
RBFOX1-204ENST00000422070 CCDC82Q8N4S0 544 aa21.8■■□□□ 1.08
RBFOX1-204ENST00000422070 SRBD1Q8N5C6 995 aaKnown RBP21.8■■□□□ 1.08
RBFOX1-204ENST00000422070 TMEM47Q9BQJ4 181 aa21.8■■□□□ 1.08
RBFOX1-204ENST00000422070 CEBPZQ03701 1054 aaKnown RBP21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 DIS3L2Q8IYB7 885 aaKnown RBP21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 LZTS2Q9BRK4 669 aa21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 TSPY26PQ9H489 355 aa21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 BRCA1P38398 1863 aaKnown RBP21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 STK38Q15208 465 aa21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 RBM43Q6ZSC3 357 aaKnown RBP21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 FAM177A1Q8N128 213 aaPredicted RBP21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 PHF20Q9BVI0 1012 aa21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 NUP62CLQ9H1M0 184 aa21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 PIM2Q9P1W9 311 aa21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 CLIC4Q9Y696 253 aa21.79■■□□□ 1.08
RBFOX1-204ENST00000422070 GREB1LQ9C091 1923 aaPredicted RBP21.78■■□□□ 1.08
RBFOX1-204ENST00000422070 IGKV6D-41A0A0C4DH26 115 aa21.78■■□□□ 1.08
RBFOX1-204ENST00000422070 SPTLC2O15270 562 aa21.78■■□□□ 1.08
RBFOX1-204ENST00000422070 TOP1P11387 765 aaKnown RBP21.78■■□□□ 1.08
RBFOX1-204ENST00000422070 SLC39A14Q15043 492 aa21.78■■□□□ 1.08
RBFOX1-204ENST00000422070 DACT1Q9NYF0 836 aa21.78■■□□□ 1.08
RBFOX1-204ENST00000422070 STX8Q9UNK0 236 aa21.78■■□□□ 1.08
RBFOX1-204ENST00000422070 V9GY48 417 aaPredicted RBP21.78■■□□□ 1.08
RBFOX1-204ENST00000422070 PPP6R2O75170 966 aa21.77■■□□□ 1.08
RBFOX1-204ENST00000422070 ME1P48163 572 aa21.77■■□□□ 1.08
RBFOX1-204ENST00000422070 PFKFB3Q16875 520 aaPredicted RBP21.77■■□□□ 1.08
RBFOX1-204ENST00000422070 RILPL1Q5EBL4 403 aa21.77■■□□□ 1.08
RBFOX1-204ENST00000422070 FUCA2Q9BTY2 467 aa21.77■■□□□ 1.08
RBFOX1-204ENST00000422070 CLSTN2Q9H4D0 955 aa21.77■■□□□ 1.08
RBFOX1-204ENST00000422070 MAD2L2Q9UI95 211 aa21.77■■□□□ 1.08
RBFOX1-204ENST00000422070 PCDHA7Q9UN72 937 aa21.77■■□□□ 1.08
RBFOX1-204ENST00000422070 MYH8P13535 1937 aa21.77■■□□□ 1.08
RBFOX1-204ENST00000422070 PALM3A6NDB9 673 aaPredicted RBP21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 BTBD18B2RXH4 712 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 ZBTB7AO95365 584 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 VIL1P09327 827 aaKnown RBP21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 SMARCA1P28370 1054 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 NFIAQ12857 509 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 PPP4R3BQ5MIZ7 849 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 RSBN1LQ6PCB5 846 aaPredicted RBP21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 CEP95Q96GE4 821 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 RBSNQ9H1K0 784 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 KCNJ14Q9UNX9 436 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 MORC2Q9Y6X9 1032 aaPredicted RBP21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 ATRNL1Q5VV63 1379 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 COL4A5P29400 1685 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 SIPA1L1O43166 1804 aa21.76■■□□□ 1.07
RBFOX1-204ENST00000422070 NR1I2O75469 434 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 SCG2P13521 617 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 LARGE2Q8N3Y3 721 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 JMYQ8N9B5 988 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 CCDC17Q96LX7 622 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 SH3GLB2Q9NR46 395 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 ENTPD3O75355 529 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 SHMT1P34896 483 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 PTPAQ15257 358 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 SF3A1Q15459 793 aaKnown RBP21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 MAP3K11Q16584 847 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 CCDC73Q6ZRK6 1079 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 CCAR1Q8IX12 1150 aaKnown RBP21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 SHISA4Q96DD7 197 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 GMLQ99445 158 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 MTMR4Q9NYA4 1195 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 FAM198AQ9UFP1 575 aa21.75■■□□□ 1.07
RBFOX1-204ENST00000422070 KRT2P35908 639 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms