RNA–Protein interactions for RNA: ENST00000420451.5

HDLBP-207, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-207ENST00000420451 MAPK4P31152 587 aa12.98□□□□□ -0.33
HDLBP-207ENST00000420451 GABPAQ06546 454 aa12.98□□□□□ -0.33
HDLBP-207ENST00000420451 MORN1Q5T089 497 aa12.98□□□□□ -0.33
HDLBP-207ENST00000420451 GPR142Q7Z601 462 aa12.98□□□□□ -0.33
HDLBP-207ENST00000420451 GDF15Q99988 308 aa12.98□□□□□ -0.33
HDLBP-207ENST00000420451 TRIM34Q9BYJ4 488 aa12.98□□□□□ -0.33
HDLBP-207ENST00000420451 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
HDLBP-207ENST00000420451 PCDHB15Q9Y5E8 787 aa12.98□□□□□ -0.33
HDLBP-207ENST00000420451 GUCY1A2P33402 732 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 BMP8BP34820 402 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 SHMT1P34896 483 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 USP5P45974 858 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 PLCD1P51178 756 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 MAP3K12Q12852 859 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 LBX2Q6XYB7 198 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 CATSPERGQ6ZRH7 1159 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 TTC6Q86TZ1 520 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 TRMT44Q8IYL2 757 aaKnown RBP12.97□□□□□ -0.33
HDLBP-207ENST00000420451 NBPF3Q9H094 633 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 KIAA1683Q9H0B3 1180 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
HDLBP-207ENST00000420451 MYH7P12883 1935 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 PFASO15067 1338 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 USP17L15C9J2P7 530 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 USP17L13C9JLJ4 530 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 USP17L11C9JVI0 530 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 USP17L18D6R9N7 530 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 USP17L22D6RA61 530 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 USP17L17D6RBQ6 530 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 USP17L19D6RCP7 530 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 USP17L20D6RJB6 530 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 COL6A1P12109 1028 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
HDLBP-207ENST00000420451 CACNB2Q08289 660 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-207ENST00000420451 USP17L24Q0WX57 530 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 CCL14Q16627 93 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 CERKLQ49MI3 558 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-207ENST00000420451 LHX8Q68G74 356 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 PLEKHH3Q7Z736 793 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 AACSQ86V21 672 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-207ENST00000420451 RHPN1Q8TCX5 695 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 ACER1Q8TDN7 264 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.96□□□□□ -0.33
HDLBP-207ENST00000420451 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.33
HDLBP-207ENST00000420451 STAP2Q9UGK3 403 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 COL6A3P12111 3177 aa12.96□□□□□ -0.33
HDLBP-207ENST00000420451 TCRBV5S4A2TA0A5A2 114 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 SOX1O00570 391 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-207ENST00000420451 IGHA2P01877 340 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-207ENST00000420451 VCAM1P19320 739 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 RGS2P41220 211 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 USP14P54578 494 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 ABCB5Q2M3G0 1257 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 APBA2Q99767 749 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 PAGR1Q9BTK6 254 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 C11orf49Q9H6J7 331 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 DNAH12Q6ZR08 3092 aa12.95□□□□□ -0.34
HDLBP-207ENST00000420451 BAZ2AQ9UIF9 1905 aaKnown RBP12.95□□□□□ -0.34
HDLBP-207ENST00000420451 PDE6AP16499 860 aa12.94□□□□□ -0.34
HDLBP-207ENST00000420451 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-207ENST00000420451 CCND3P30281 292 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-207ENST00000420451 EVX2Q03828 476 aa12.94□□□□□ -0.34
HDLBP-207ENST00000420451 MAP2K5Q13163 448 aa12.94□□□□□ -0.34
HDLBP-207ENST00000420451 TTF1Q15361 905 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-207ENST00000420451 ZYXQ15942 572 aaKnown RBP12.94□□□□□ -0.34
HDLBP-207ENST00000420451 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
HDLBP-207ENST00000420451 C7orf61Q8IZ16 206 aa12.94□□□□□ -0.34
HDLBP-207ENST00000420451 BTBD7Q9P203 1132 aa12.94□□□□□ -0.34
HDLBP-207ENST00000420451 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
HDLBP-207ENST00000420451 A0A1W2PRG0 241 aa12.93□□□□□ -0.34
HDLBP-207ENST00000420451 SPDYE16A6NNV3 312 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-207ENST00000420451 HOXC6P09630 235 aa12.93□□□□□ -0.34
HDLBP-207ENST00000420451 PTPREP23469 700 aa12.93□□□□□ -0.34
HDLBP-207ENST00000420451 RAB3GAP1Q15042 981 aa12.93□□□□□ -0.34
HDLBP-207ENST00000420451 LRCH3Q96II8 777 aa12.93□□□□□ -0.34
HDLBP-207ENST00000420451 FEZ1Q99689 392 aa12.93□□□□□ -0.34
HDLBP-207ENST00000420451 FLRT1Q9NZU1 646 aa12.93□□□□□ -0.34
HDLBP-207ENST00000420451 ZNF532Q9HCE3 1301 aa12.92□□□□□ -0.34
HDLBP-207ENST00000420451 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
HDLBP-207ENST00000420451 APBB1O00213 710 aa12.92□□□□□ -0.34
HDLBP-207ENST00000420451 CCNA1P78396 465 aa12.92□□□□□ -0.34
HDLBP-207ENST00000420451 GRB14Q14449 540 aa12.92□□□□□ -0.34
HDLBP-207ENST00000420451 SEPT2Q15019 361 aa12.92□□□□□ -0.34
HDLBP-207ENST00000420451 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
HDLBP-207ENST00000420451 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
HDLBP-207ENST00000420451 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
HDLBP-207ENST00000420451 EDC3Q96F86 508 aaKnown RBP12.92□□□□□ -0.34
HDLBP-207ENST00000420451 RPAP3Q9H6T3 665 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-207ENST00000420451 CABP5Q9NP86 173 aa12.92□□□□□ -0.34
HDLBP-207ENST00000420451 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-207ENST00000420451 ZMYND8Q9ULU4 1186 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-207ENST00000420451 COL11A1P12107 1806 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-207ENST00000420451 GREB1LQ9C091 1923 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-207ENST00000420451 LTBP2Q14767 1821 aa12.91□□□□□ -0.34
HDLBP-207ENST00000420451 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-207ENST00000420451 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms