RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 LETMD1Q6P1Q0 360 aa6.1□□□□□ -1.43
SEMA3A-202ENST00000420047 LRFN4Q6PJG9 635 aa6.1□□□□□ -1.43
SEMA3A-202ENST00000420047 HID1Q8IV36 788 aa6.1□□□□□ -1.43
SEMA3A-202ENST00000420047 MYLIPQ8WY64 445 aa6.1□□□□□ -1.43
SEMA3A-202ENST00000420047 FBRSQ9HAH7 460 aa6.1□□□□□ -1.43
SEMA3A-202ENST00000420047 SNCAIPQ9Y6H5 919 aa6.1□□□□□ -1.43
SEMA3A-202ENST00000420047 CHD1O14646 1710 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 PRAMEF27A3QJZ7 478 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 CBX7O95931 251 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 RASIP1Q5U651 963 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 PIWIL2Q8TC59 973 aaKnown RBP6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 FBF1Q8TES7 1133 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 C1orf115Q9H7X2 142 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 ZSWIM5Q9P217 1185 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 DCTN4Q9UJW0 460 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 TMEM59LQ9UK28 342 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 ABCC8Q09428 1581 aa6.09□□□□□ -1.43
SEMA3A-202ENST00000420047 ARHGEF11O15085 1522 aa6.09□□□□□ -1.44
SEMA3A-202ENST00000420047 TREHO43280 583 aa6.08□□□□□ -1.44
SEMA3A-202ENST00000420047 NUAK1O60285 661 aa6.08□□□□□ -1.44
SEMA3A-202ENST00000420047 CST3P01034 146 aaPredicted RBP6.08□□□□□ -1.44
SEMA3A-202ENST00000420047 HPXP02790 462 aa6.08□□□□□ -1.44
SEMA3A-202ENST00000420047 LINC00310P59036 64 aa6.08□□□□□ -1.44
SEMA3A-202ENST00000420047 RIN3Q8TB24 985 aa6.08□□□□□ -1.44
SEMA3A-202ENST00000420047 KCNK12Q9HB15 430 aa6.08□□□□□ -1.44
SEMA3A-202ENST00000420047 SNAPC4Q5SXM2 1469 aa6.08□□□□□ -1.44
SEMA3A-202ENST00000420047 DNAJC25-GNG10A0A024R161 153 aa6.07□□□□□ -1.44
SEMA3A-202ENST00000420047 SOWAHDA6NJG2 315 aa6.07□□□□□ -1.44
SEMA3A-202ENST00000420047 ESR1P03372 595 aa6.07□□□□□ -1.44
SEMA3A-202ENST00000420047 NKG7Q16617 165 aa6.07□□□□□ -1.44
SEMA3A-202ENST00000420047 RALGPS1Q5JS13 557 aa6.07□□□□□ -1.44
SEMA3A-202ENST00000420047 PCNX4Q63HM2 1172 aa6.07□□□□□ -1.44
SEMA3A-202ENST00000420047 PLPPR2Q96GM1 343 aa6.07□□□□□ -1.44
SEMA3A-202ENST00000420047 FBXO24O75426 580 aa6.06□□□□□ -1.44
SEMA3A-202ENST00000420047 ETF1P62495 437 aaKnown RBP6.06□□□□□ -1.44
SEMA3A-202ENST00000420047 TNK2Q07912 1038 aa6.06□□□□□ -1.44
SEMA3A-202ENST00000420047 PDE4CQ08493 712 aa6.06□□□□□ -1.44
SEMA3A-202ENST00000420047 OSBPL7Q9BZF2 842 aa6.06□□□□□ -1.44
SEMA3A-202ENST00000420047 TACC3Q9Y6A5 838 aa6.06□□□□□ -1.44
SEMA3A-202ENST00000420047 ARAP1Q96P48 1450 aa6.05□□□□□ -1.44
SEMA3A-202ENST00000420047 HOXA5P20719 270 aa6.05□□□□□ -1.44
SEMA3A-202ENST00000420047 HK2P52789 917 aa6.05□□□□□ -1.44
SEMA3A-202ENST00000420047 ERVFC1P60507 584 aa6.05□□□□□ -1.44
SEMA3A-202ENST00000420047 PTPN11Q06124 597 aaPredicted RBP6.05□□□□□ -1.44
SEMA3A-202ENST00000420047 PRAMEF13Q5VWM6 474 aa6.05□□□□□ -1.44
SEMA3A-202ENST00000420047 ALG1LQ6GMV1 187 aa6.04□□□□□ -1.44
SEMA3A-202ENST00000420047 SV2BQ7L1I2 683 aa6.04□□□□□ -1.44
SEMA3A-202ENST00000420047 IRF2BP1Q8IU81 584 aa6.04□□□□□ -1.44
SEMA3A-202ENST00000420047 LILRA2Q8N149 483 aa6.04□□□□□ -1.44
SEMA3A-202ENST00000420047 RELTQ969Z4 430 aa6.04□□□□□ -1.44
SEMA3A-202ENST00000420047 C20orf173Q96LM9 149 aa6.04□□□□□ -1.44
SEMA3A-202ENST00000420047 ADAMTS10Q9H324 1103 aa6.04□□□□□ -1.44
SEMA3A-202ENST00000420047 PARD6AQ9NPB6 346 aa6.04□□□□□ -1.44
SEMA3A-202ENST00000420047 GAPVD1Q14C86 1478 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 PEX10O60683 326 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 CELA3AP09093 270 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 ETV3P41162 512 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 WIPI1Q5MNZ9 446 aaPredicted RBP6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 CDH24Q86UP0 819 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 CREG2Q8IUH2 290 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 PDZD8Q8NEN9 1154 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 BAHD1Q8TBE0 780 aaPredicted RBP6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 GAL3ST3Q96A11 431 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 IRF2BPLQ9H1B7 796 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 SLC6A17Q9H1V8 727 aa6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 TRIT1Q9H3H1 467 aaKnown RBP6.03□□□□□ -1.44
SEMA3A-202ENST00000420047 GRIN2BQ13224 1484 aa6.02□□□□□ -1.44
SEMA3A-202ENST00000420047 ERCC6L2Q5T890 1561 aa6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 SEMA7AO75326 666 aa6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 GRK4P32298 578 aa6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 GAB4Q2WGN9 574 aa6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 MRPL41Q8IXM3 137 aaKnown RBP6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 OXR1Q8N573 874 aa6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 RNF32Q9H0A6 362 aa6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 DUSP15Q9H1R2 295 aaPredicted RBP6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 SP110Q9HB58 689 aa6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 FAM8A1Q9UBU6 413 aa6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 BIN2Q9UBW5 565 aaPredicted RBP6.02□□□□□ -1.45
SEMA3A-202ENST00000420047 SYNJ1O43426 1573 aa6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 TTBK1Q5TCY1 1321 aaPredicted RBP6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 GFRA2O00451 464 aa6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 MAPK1P28482 360 aa6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 TPP2P29144 1249 aaPredicted RBP6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 NR0B2Q15466 257 aa6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 SLC6A19Q695T7 634 aa6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 XAGE3Q8WTP9 111 aa6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 CWC22Q9HCG8 908 aaKnown RBP6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 SPG7Q9UQ90 795 aa6.01□□□□□ -1.45
SEMA3A-202ENST00000420047 WRNQ14191 1432 aaPredicted RBP eCLIP6□□□□□ -1.45
SEMA3A-202ENST00000420047 FITM1A5D6W6 292 aa6□□□□□ -1.45
SEMA3A-202ENST00000420047 RPS26P62854 115 aaKnown RBP6□□□□□ -1.45
SEMA3A-202ENST00000420047 DLG4P78352 724 aa6□□□□□ -1.45
SEMA3A-202ENST00000420047 DHX38Q92620 1227 aaKnown RBP6□□□□□ -1.45
SEMA3A-202ENST00000420047 GPR62Q9BZJ7 368 aa6□□□□□ -1.45
SEMA3A-202ENST00000420047 MCOLN1Q9GZU1 580 aa6□□□□□ -1.45
SEMA3A-202ENST00000420047 ZCCHC4Q9H5U6 513 aa6□□□□□ -1.45
SEMA3A-202ENST00000420047 C12orf49Q9H741 205 aa6□□□□□ -1.45
SEMA3A-202ENST00000420047 GPATCH2Q9NW75 528 aa6□□□□□ -1.45
SEMA3A-202ENST00000420047 GNEQ9Y223 722 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms