RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 FKBP1CQ5VVH2 108 aa14.96□□□□□ -0.01
LINC00642-201ENST00000419459 C16orf86Q6ZW13 317 aa14.96□□□□□ -0.01
LINC00642-201ENST00000419459 FAM83AQ86UY5 434 aa14.96□□□□□ -0.01
LINC00642-201ENST00000419459 TEPSINQ96N21 525 aa14.96□□□□□ -0.01
LINC00642-201ENST00000419459 DHX36Q9H2U1 1008 aaKnown RBP14.96□□□□□ -0.01
LINC00642-201ENST00000419459 NPM3O75607 178 aaKnown RBP14.95□□□□□ -0.02
LINC00642-201ENST00000419459 ADCY5O95622 1261 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 NBPF12Q5TAG4 269 aaPredicted RBP14.95□□□□□ -0.02
LINC00642-201ENST00000419459 TTC14Q96N46 770 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 TM6SF1Q9BZW5 370 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 RNF41Q9H4P4 317 aaPredicted RBP14.95□□□□□ -0.02
LINC00642-201ENST00000419459 PRC1O43663 620 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 SLC3A2P08195 630 aaKnown RBP14.95□□□□□ -0.02
LINC00642-201ENST00000419459 FGRP09769 529 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 RASA1P20936 1047 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 SHMT1P34896 483 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 TNNI2P48788 182 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 AK2P54819 239 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 UBE2HP62256 183 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 USP50Q70EL3 339 aaPredicted RBP14.95□□□□□ -0.02
LINC00642-201ENST00000419459 DHX32Q7L7V1 743 aaKnown RBP14.95□□□□□ -0.02
LINC00642-201ENST00000419459 USP48Q86UV5 1035 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 SENP2Q9HC62 589 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 PDRG1Q9NUG6 133 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 PGAP2Q9UHJ9 254 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 ATP6V1DQ9Y5K8 247 aa14.95□□□□□ -0.02
LINC00642-201ENST00000419459 TSPY2A6NKD2 308 aa14.94□□□□□ -0.02
LINC00642-201ENST00000419459 DTNBO60941 627 aa14.94□□□□□ -0.02
LINC00642-201ENST00000419459 Q6ZUG5 572 aa14.94□□□□□ -0.02
LINC00642-201ENST00000419459 KRT26Q7Z3Y9 468 aa14.94□□□□□ -0.02
LINC00642-201ENST00000419459 CLEC10AQ8IUN9 316 aa14.94□□□□□ -0.02
LINC00642-201ENST00000419459 APOBEC3FQ8IUX4 373 aaKnown RBP14.94□□□□□ -0.02
LINC00642-201ENST00000419459 CNNM2Q9H8M5 875 aa14.94□□□□□ -0.02
LINC00642-201ENST00000419459 USP25Q9UHP3 1055 aa14.94□□□□□ -0.02
LINC00642-201ENST00000419459 GOLGA6L6A8MZA4 724 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 GDF11O95390 407 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 FGD1P98174 961 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 TFAP4Q01664 338 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 EXOSC10Q01780 885 aaKnown RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 TOB2Q14106 344 aaPredicted RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 RRP1BQ14684 758 aaKnown RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 ESR2Q92731 530 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 DCPSQ96C86 337 aaKnown RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 CHAMP1Q96JM3 812 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 KRT23Q9C075 422 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 COL2A1P02458 1487 aaPredicted RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 VEGFAP15692 232 aaPredicted RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 FMR1Q06787 632 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 PRKG1Q13976 671 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 SYCP1Q15431 976 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 FOXD4L5Q5VV16 416 aaPredicted RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 MAP1SQ66K74 1059 aaPredicted RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 SULF1Q8IWU6 871 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 FOXD4L4Q8WXT5 416 aaPredicted RBP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 BRF1Q92994 677 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 FEZ1Q99689 392 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 TRIM34Q9BYJ4 488 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 EHD4Q9H223 541 aa14.93□□□□□ -0.02
LINC00642-201ENST00000419459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC00642-201ENST00000419459 SSC5DA1L4H1 1573 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 ORC4O43929 436 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 HMGB1P09429 215 aaKnown RBP14.92□□□□□ -0.02
LINC00642-201ENST00000419459 TSPY3P0CV98 308 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 TSPY8P0CW00 308 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 AKR1B1P15121 316 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 PPP4R3BQ5MIZ7 849 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 TAF3Q5VWG9 929 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 RAB11FIP4Q86YS3 637 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 ZNF444Q8N0Y2 327 aaPredicted RBP14.92□□□□□ -0.02
LINC00642-201ENST00000419459 KIAA1524Q8TCG1 905 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 ANKRD7Q92527 254 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 CHMP4CQ96CF2 233 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 GLIS2Q9BZE0 524 aaPredicted RBP14.92□□□□□ -0.02
LINC00642-201ENST00000419459 PRDM10Q9NQV6 1147 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 TNKSO95271 1327 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 MPHOSPH10O00566 681 aaKnown RBP14.92□□□□□ -0.02
LINC00642-201ENST00000419459 GADD45BO75293 160 aaPredicted RBP14.92□□□□□ -0.02
LINC00642-201ENST00000419459 LARGE1O95461 756 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 JAG1P78504 1218 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 PNMA8AQ86V59 439 aaPredicted RBP14.92□□□□□ -0.02
LINC00642-201ENST00000419459 PDCL2Q8N4E4 241 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 IL17RBQ9NRM6 502 aa14.92□□□□□ -0.02
LINC00642-201ENST00000419459 PITPNM2Q9BZ72 1349 aa14.91□□□□□ -0.02
LINC00642-201ENST00000419459 CTIFO43310 598 aaKnown RBP14.91□□□□□ -0.02
LINC00642-201ENST00000419459 APOBRQ0VD83 1088 aa14.91□□□□□ -0.02
LINC00642-201ENST00000419459 UBAC1Q9BSL1 405 aa14.91□□□□□ -0.02
LINC00642-201ENST00000419459 TTC12Q9H892 705 aaPredicted RBP14.91□□□□□ -0.02
LINC00642-201ENST00000419459 NAP1L2Q9ULW6 460 aaPredicted RBP14.91□□□□□ -0.02
LINC00642-201ENST00000419459 ATAD5Q96QE3 1844 aa14.91□□□□□ -0.02
LINC00642-201ENST00000419459 IFIT3O14879 490 aaKnown RBP14.9□□□□□ -0.02
LINC00642-201ENST00000419459 PCP11498 1178 aaKnown RBP14.9□□□□□ -0.02
LINC00642-201ENST00000419459 RXRAP19793 462 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 CERKLQ49MI3 558 aaPredicted RBP14.9□□□□□ -0.02
LINC00642-201ENST00000419459 TMEM67Q5HYA8 995 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 FOXP4Q8IVH2 680 aaPredicted RBP14.9□□□□□ -0.02
LINC00642-201ENST00000419459 ENAHQ8N8S7 591 aaPredicted RBP14.9□□□□□ -0.02
LINC00642-201ENST00000419459 IGDCC4Q8TDY8 1250 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms