RNA–Protein interactions for RNA: ENST00000418766.5

TTC3-207, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-207ENST00000418766 TRIM47Q96LD4 638 aa18.41■□□□□ 0.54
TTC3-207ENST00000418766 MAGEC2Q9UBF1 373 aaPredicted RBP18.41■□□□□ 0.54
TTC3-207ENST00000418766 HPSEQ9Y251 543 aa18.41■□□□□ 0.54
TTC3-207ENST00000418766 TRIM66O15016 1216 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 EIF3JO75822 258 aaKnown RBP18.4■□□□□ 0.54
TTC3-207ENST00000418766 TXLNAP40222 546 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 KANK3Q6NY19 840 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 CRACR2BQ8N4Y2 399 aaPredicted RBP18.4■□□□□ 0.54
TTC3-207ENST00000418766 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
TTC3-207ENST00000418766 FAM217BQ9NTX9 383 aaPredicted RBP18.4■□□□□ 0.54
TTC3-207ENST00000418766 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.4■□□□□ 0.542e-8■■■□□ 18.7
TTC3-207ENST00000418766 CD44P16070 742 aaKnown RBP18.4■□□□□ 0.54
TTC3-207ENST00000418766 FXR1P51114 621 aaKnown RBP eCLIP18.4■□□□□ 0.542e-6■■■■□ 21.8
TTC3-207ENST00000418766 PLCD1P51178 756 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 EARS2Q5JPH6 523 aaKnown RBP18.4■□□□□ 0.54
TTC3-207ENST00000418766 LPIN2Q92539 896 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 CWC15Q9P013 229 aaKnown RBP18.4■□□□□ 0.54
TTC3-207ENST00000418766 FBXO2Q9UK22 296 aaPredicted RBP18.4■□□□□ 0.54
TTC3-207ENST00000418766 IFNAR1P17181 557 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 UBE3CQ15386 1083 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 SMIM5Q71RC9 77 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 GPKOWQ92917 476 aaPredicted RBP eCLIP18.4■□□□□ 0.545e-8■■□□□ 11.4
TTC3-207ENST00000418766 GDAQ9Y2T3 454 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 MRFAP1Q9Y605 127 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 JCADQ9P266 1359 aa18.4■□□□□ 0.54
TTC3-207ENST00000418766 LTN1O94822 1766 aa18.39■□□□□ 0.54
TTC3-207ENST00000418766 TRIM21P19474 475 aaKnown RBP18.39■□□□□ 0.54
TTC3-207ENST00000418766 PPARAQ07869 468 aa18.39■□□□□ 0.54
TTC3-207ENST00000418766 ENOX1Q8TC92 643 aaKnown RBP18.39■□□□□ 0.54
TTC3-207ENST00000418766 MAGEB6P1A0A0J9YX57 407 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 TRIM49BA6NDI0 452 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 TSPY2A6NKD2 308 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 GSG1L2A8MUP6 293 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 CYP2C19P33261 490 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 NTRK3Q16288 839 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 TTC38Q5R3I4 469 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 GIGYF2Q6Y7W6 1299 aaKnown RBP18.39■□□□□ 0.53
TTC3-207ENST00000418766 GSPT2Q8IYD1 628 aaKnown RBP18.39■□□□□ 0.53
TTC3-207ENST00000418766 ISCA1Q9BUE6 129 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.53
TTC3-207ENST00000418766 STAT6P42226 847 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 CCDC122Q5T0U0 273 aa18.39■□□□□ 0.53
TTC3-207ENST00000418766 NIP7Q9Y221 180 aaKnown RBP eCLIP18.39■□□□□ 0.53
TTC3-207ENST00000418766 TUBB4AP04350 444 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 MAP3K9P80192 1104 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 PAGE5Q96GU1 130 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.38■□□□□ 0.53
TTC3-207ENST00000418766 RFX7Q2KHR2 1363 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 CCDC178Q5BJE1 867 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 NELFBQ8WX92 580 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 ADGRG1Q9Y653 693 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 SOS2Q07890 1332 aaPredicted RBP18.38■□□□□ 0.53
TTC3-207ENST00000418766 NALCNQ8IZF0 1738 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 PDE8AO60658 829 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 ZPR1O75312 459 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 RAD51AP2Q09MP3 1159 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 SPATA1Q5VX52 437 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 SRGAP1Q7Z6B7 1085 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 RABGGTAQ92696 567 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 NAPGQ99747 312 aaPredicted RBP18.38■□□□□ 0.53
TTC3-207ENST00000418766 STX8Q9UNK0 236 aa18.38■□□□□ 0.53
TTC3-207ENST00000418766 USP17L12C9JPN9 530 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 USP17L21D6R901 530 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 CEP112Q8N8E3 955 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 CHP1Q99653 195 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 A0A087X0B3 334 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 CUL4BQ13620 913 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 TTC19Q6DKK2 380 aaPredicted RBP18.37■□□□□ 0.53
TTC3-207ENST00000418766 DHX37Q8IY37 1157 aaKnown RBP18.37■□□□□ 0.53
TTC3-207ENST00000418766 DEF6Q9H4E7 631 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
TTC3-207ENST00000418766 UBA7P41226 1012 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 HDXQ7Z353 690 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 PNKPQ96T60 521 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 TFCP2L1Q9NZI6 479 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 SLIT1O75093 1534 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 CPDO75976 1380 aa18.37■□□□□ 0.53
TTC3-207ENST00000418766 ERVV-2B6SEH9 535 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 H3BQF6 201 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 MARCH6O60337 910 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 CNGA4Q8IV77 575 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 TUBGCP6Q96RT7 1819 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 PP2D1A8MPX8 630 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 MTIF2P46199 727 aaKnown RBP18.36■□□□□ 0.53
TTC3-207ENST00000418766 RNASE9P60153 205 aaKnown RBP18.36■□□□□ 0.53
TTC3-207ENST00000418766 CYP27A1Q02318 531 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 IQUBQ8NA54 791 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 CCDC148Q8NFR7 591 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 CRACR2AQ9BSW2 395 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 GNL3LQ9NVN8 582 aaKnown RBP18.36■□□□□ 0.53
TTC3-207ENST00000418766 ZNHIT6Q9NWK9 470 aaKnown RBP18.36■□□□□ 0.53
TTC3-207ENST00000418766 SRPRBQ9Y5M8 271 aaKnown RBP18.36■□□□□ 0.53
TTC3-207ENST00000418766 WNT7AO00755 349 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 SSBP05455 408 aaKnown RBP eCLIP18.36■□□□□ 0.53
TTC3-207ENST00000418766 IBSPP21815 317 aaPredicted RBP18.36■□□□□ 0.53
TTC3-207ENST00000418766 CENPHQ9H3R5 247 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 POLD4Q9HCU8 107 aa18.36■□□□□ 0.53
TTC3-207ENST00000418766 MAP3K15Q6ZN16 1313 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms